Detailed information on CNT30527503


BLAST search results

BLAST vs Swiss-Prot:
sp|P93311|RM02_ARATH, E-value = 1e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553971Eucalyptus grandisOryza glaberrima46.8314.7790.6296forward
CNT30576813Eucalyptus grandisOryza barthii46.8313.0390.6296reverse complement

Expression of CNT30527503

Peptides detected in this lncRNA

>peptide 1 (66 aa)
AQRENVFFPLSLSSLIRGVKKAGFAPATAILGKQIELPKERDAVSSLAFGEEKAEKKTSFAQVFLLP

>peptide 2 (67 aa)
RPKRERVFSSEFILSHSRSEESGLCPSYRYPWKTNRATEGKGCSLFLGLWRGEGRKENVLRASFFASC

Sequence

>CNT30527503
CCGCCCAAAGAGAGAACGTGTTTTTTCCTCTGAGTTTATCCTCTCTCATTCGCGGAGTGAAGAAAGCGGGCTTTGCCCCAGCTACCGCTATCCTTGGAAA
ACAAATAGAGCTACCGAAGGAAAGGGATGCAGTCTCTTCCTTGGCCTTTGGAGAGGAGAAGGCAGAAAAGAAAACGTCCTTCGCGCAAGTTTTTTTGCTT
CCTGC