Detailed information on CNT30526965


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT001662, E-value = 2e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202037Eucalyptus grandisPisum sativum39.072.5886.984reverse complement
CNT30186776Eucalyptus grandisSecale cereale33.951.8289.0473reverse complement
CNT30560220Eucalyptus grandisActinidia chinensis61.48.4993.94132reverse complement
CNT30232496Eucalyptus grandisAnanas comosus62.7922.7789.63135reverse complement
CNT30205718Eucalyptus grandisHelianthus annuus60.9332.4390.84131reverse complement
CNT30682212Eucalyptus grandisTriticum urartu33.952.2189.0473reverse complement
CNT3057356Eucalyptus grandisAmborella trichopoda59.075.2885.04127reverse complement

Expression of CNT30526965

Peptides detected in this lncRNA

>peptide 1 (39 aa)
RQIWLILYFMCCIHENMILLIEKGLCLLIFLHLGSGLYH*

Sequence

>CNT30526965
AGGCAAATTTGGTTAATTCTTTACTTTATGTGTTGTATTCATGAGAATATGATTCTTTTGATAGAGAAGGGGCTATGCCTTCTTATATTTCTACATCTAG
GATCCGGCTTGTATCATTGATACTAATAGGAACTGAACCATTATGGCAAGGAAAAGTTTGATTCAGTGGGAGAAGAAGAGGCAAAAATTGGAACAAAAGT
ATCATTTGATTTGTC