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Detailed information on CNT30526827


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641749Phaseolus vulgarisNymphaea colorata10067.3694.181271reverse complement
CNT30532002Phaseolus vulgarisEucalyptus grandis99.7634.6895.981268reverse complement
CNT30550163Phaseolus vulgarisIpomoea triloba99.8462.7995.981269reverse complement
CNT30519028Phaseolus vulgarisJuglans regia99.7655.1596.691268forward
CNT30374088Phaseolus vulgarisArabidopsis thaliana87.6565.4995.511114reverse complement
CNT30619309Phaseolus vulgarisSesamum indicum96.9356.0894.721232forward
CNT30632375Phaseolus vulgarisVigna unguiculata99.7647.6599.131268reverse complement
CNT30195048Phaseolus vulgarisPisum sativum99.7633.7198.191268reverse complement
CNT30507933Phaseolus vulgarisNicotiana attenuata99.7662.3796.371268reverse complement
CNT30711135Phaseolus vulgarisGlycine max98.6639.4799.521254reverse complement
CNT3047214Phaseolus vulgarisPrunus dulcis99.8440.3495.041269reverse complement
CNT30542906Phaseolus vulgarisBrassica napus99.8474.7394.091269reverse complement
CNT30311451Phaseolus vulgarisCamelina sativa99.7680.293.061268reverse complement
CNT30434123Phaseolus vulgarisPapaver somniferum100.0847.894.971272reverse complement
CNT3023562Phaseolus vulgarisPopulus trichocarpa99.8456.8596.611269forward

Expression of CNT30526827

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MCRPSQTPHLTMSSARIDRPKPTLGPKRGAAPRFRFTE*

>peptide 2 (53 aa)
MSTTGRGRHSVLRIFKGRRGRTGHHATCGALPAAGPYLRLSRFQGGQAVKQKR*

Sequence

>CNT30526827
TTTAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCA
GCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGACCGGCCGAAGCCGACCTTGGGTCCAAAAAGAGGGGCAGCGCCCCGCTTCCGATTCACGGA
ATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGTTGTTTCCAGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGA
GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT
TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC
TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCT
TGTCCGTACCAGTTCTGAGTTGACTGTTCGACGCCCGGGGAAGAGGCCCCGAAGGGCCCGTTCCCAATCCGTCCCCCGACCGGCACGCGACGACCCGCTC
TCGCCGCGGGAGCAGCTCGAGCAGTCCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTAC
GGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGGA
GGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAG
CCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTTCCGGGGCCCCCGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAGCCGCCACG
TCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGGAGTACGCGCTCGGAGCGCTATCAGACGGGCTTCCCCCGTCCCTTAGGATCGACTAACCCATGTG
CAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACC