Detailed information on CNT30526769


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515285Phaseolus vulgarisJuglans regia24.839.6493.1573forward
CNT30698009Phaseolus vulgarisQuercus lobata26.8725.489.8779reverse complement
CNT30373911Phaseolus vulgarisArabidopsis thaliana20.4120.0791.6760reverse complement
CNT30711418Phaseolus vulgarisGlycine max52.7250.9987.1155forward
CNT30172422Phaseolus vulgarisTrifolium pratense51.3647.7887.42151forward
CNT30612154Phaseolus vulgarisArabis alpina24.8324.0189.0473reverse complement
CNT30652801Phaseolus vulgarisRosa chinensis25.8524.8490.7976forward
CNT30478499Phaseolus vulgarisArabidopsis halleri47.9645.9383.69141forward
CNT30410045Phaseolus vulgarisPapaver somniferum23.8123.659070reverse complement
CNT3026903Phaseolus vulgarisPopulus trichocarpa28.2327.391.5783forward

Expression of CNT30526769

Peptides detected in this lncRNA

>peptide 1 (49 aa)
LSWVTPACDPSGSITVIEQHRGLLGLQYVGLPTPSPELSLGTLVKAKVS*

Sequence

>CNT30526769
GCTGAGCTGGGTTACTCCAGCTTGTGACCCAAGTGGGAGCATTACTGTGATCGAACAACATCGAGGCTTGCTGGGTTTGCAATATGTTGGCCTGCCCACT
CCAAGTCCAGAGTTGAGTCTGGGGACTTTAGTGAAGGCTAAGGTCTCTTGACTCTTAGAGTGGAGGGCACAGCGTGAGGCTGGTTTCACAGAGCAGCGAC
CACCTCCCACTCCTGACAGTGGAGGGATTACAGGCTGCAGCAGCCTCAGTCCTTAATGGCCTGGTCAGCCTAGTTTGCTTGGACTATCACTTTT