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Detailed information on CNT30526763


BLAST search results

BLAST vs Swiss-Prot:
sp|P33080|AX10A_SOYBN, E-value = 1e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3090059Phaseolus vulgarisSolanum tuberosum28.0119.6383.22149forward
CNT3084365Phaseolus vulgarisVigna radiata73.1238.7189.72389forward
CNT30144937Phaseolus vulgarisMedicago truncatula26.1333.4981.29139forward

Expression of CNT30526763

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MKRKCDIDQIHRKCEKKLCRKLLIQINILLHLPKQDTKNGERG*

Sequence

>CNT30526763
GGTTGATAGATGAAGAGAAAATGTGATATTGATCAAATTCATAGAAAATGTGAGAAAAAACTGTGTAGAAAACTTCTCATTCAGATTAACATTCTTTTAC
ACTTGCCTAAACAAGATACCAAAAATGGAGAGAGGGGATAATTTCAAGGTAAGAAACTATGATACAAAAATGTGTCAGAGTATATAGTCTACATCTAAGT
CAGTTCCATCTTCATGCACTTAGCACCTATTCAAGCGAGAAGTGATATCTAAGAACACATCTTCTCCACAAGGAATTGTGAGACAACCCAGTGGATGATC
ATACCCAAATTCTTCCTCAGATTGACTCAACAAATCTTGAAATGAAGGTTGGTTCAAGTATGATACAGGGATCATGAACCGCTTCATTTTGTCTCCAACA
TATACTGCAATGTAACCCTTTGGCACGTCCACAGCTTTTGAAAATGCTTGAAGTGAAGGAAGGGACGCCTTTCTGATAGCACGTAAACTAAAACCCATGT
TTTATAAGTTGATACTTGGGAAGAGAAAGTTG