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Detailed information on CNT30526705


BLAST search results

BLAST vs Swiss-Prot:
sp|P84977|GRP3_POPEU, E-value = 1e-12

BLAST vs NONCODE:
NONGMAT000264, E-value = 2e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632012Phaseolus vulgarisVigna unguiculata86.7291.8489.14405forward
CNT30710461Phaseolus vulgarisGlycine max46.932.3588.13219forward
CNT30620238Phaseolus vulgarisCajanus cajan46.0421.4688.37215forward
CNT30408881Phaseolus vulgarisPapaver somniferum30.1913.8185.82141forward
CNT30724703Phaseolus vulgarisLupinus angustifolius26.7738.9482.4125forward

Expression of CNT30526705

Peptides detected in this lncRNA

>peptide 1 (31 aa)
NHGPCLHRNHHHHHHNHHCASFTVMLRPSRF*

>peptide 2 (30 aa)
MACSEEKVTNPKPLDLPVSRSLIIYKLKYH*

Sequence

>CNT30526705
ATAACCACGGTCCCTGCCTCCACCGTAACCACCACCACCACCACCATAACCACCACTGCGCTTCGTTCACAGTGATGTTACGACCGTCAAGGTTCTGACC
GTTCATTCCTTCGATCGCTTCTCTCATGGCCTGCTCTGAGGAAAAGGTCACGAATCCGAAACCCCTGGATCTTCCAGTCTCACGATCATTGATAATCTAC
AAATTAAAATACCATTGATACATCAGATCTAAGACGAAACGCAATAAAACATAACCGAATAGAACCCGATCGATCTTCGCCTTTGAACAAAGGATGAAGA
TGAACGTACCTATTGGCGTGAGTAAAAAAAGAATCATATAGTAACAAGTAGAAGTATCATAGATCTAGTAACGCAAAAAAATCAGAGATCACAGATCAGA
ATGGGAGCGAGAAATTCCGAATCCGAATCGTGTCAGATCAGATGCGGTCACTGCAACAAACAGACCT