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Detailed information on CNT30526646


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730658Phaseolus vulgarisCorchorus capsularis20.2518.2285.31143reverse complement
CNT30163195Phaseolus vulgarisPistacia vera8.0724.4687.7257forward
CNT30723626Phaseolus vulgarisLupinus angustifolius18.5622.5987.79131forward

Expression of CNT30526646

Peptides detected in this lncRNA

>peptide 1 (31 aa)
HLSTQLHQITTAKKVPHLTVKINYSITYNIN*

Sequence

>CNT30526646
CATCTCAGCACTCAGTTACATCAGATTACTACAGCTAAGAAAGTACCCCATTTGACAGTAAAAATAAATTATTCTATTACATATAACATAAATTAATTAG
TTTACTGGGTTATCTGTCAATTAGTAATCTATTTCCTCATCCAGATACAGAAGAAAGAGTTCTCCATTGATTCAATCACTCTACCTACGAGATAAGGATA
GAGAAAGAGGAAAAAACCGAGAATTTCAGATATTACTTTTGATCCAAAAATCGATCTGATTTTTTTGGTACTTTTCGCTCAATGATGAAATGGGTCAGAT
TCTACAGGACCAAACCTTGTGGGAGTTAAGGAATGATGAAAGAAAAGAAAAAAAATAAAGTAAATAAAATTGCAGTAGAAGAGTCCTGATTCCAAACGAA
AAAATTCAAACTTGATTGAAAAGGATCTCTCTGATTATTGAAGATGTAAAGGAATTGGTATTATTCCCAAAGTCAGGAACTTGATCAAGAAAGAAATCTG
TGCTCAGGAGAGTAAGGAAACGGGAGGTAGTTTCATGAAAACAACATCTCCAGACACAAAGAAGGTCCTCTTTCTGCAGGACATTCAATTTCTAAAGCTT
GTAAGTTGTAACCAATAAGATAATCCACAAATACAGCAAGGACAGCCTGAGAACTGAATTTAGTCCTCAGAATGAGTCAGGTGGATGCAAAGGAAAGACA
ACAAAG