« Back to Phaseolus vulgaris search


Detailed information on CNT30526608


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LQQ4|H2B1_ARATH, E-value = 2e-56

BLAST vs NONCODE:
NONGMAT000269, E-value = 1e-165

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518203Phaseolus vulgarisJuglans regia43.6339.6282.15353forward
CNT30702570Phaseolus vulgarisQuercus lobata33.6254.484.56272forward
CNT30618877Phaseolus vulgarisSesamum indicum33.9934.9483.27275forward
CNT3072234Phaseolus vulgarisQuercus suber22.528.8983.52182forward
CNT30379530Phaseolus vulgarisManihot esculenta32.3946.0580.53262forward
CNT30200173Phaseolus vulgarisPisum sativum54.1473.3786.07438forward
CNT3094085Phaseolus vulgarisSolanum tuberosum32.1451.4981.92260forward
CNT30586986Phaseolus vulgarisMusa acuminata32.8875.1483.08266forward
CNT30172842Phaseolus vulgarisTrifolium pratense55.3880.8783.93448forward
CNT30597299Phaseolus vulgarisFraxinus excelsior33.8749.9181.39274forward
CNT30131583Phaseolus vulgarisLolium perenne22.1342.2283.8179forward
CNT3015998Phaseolus vulgarisZea mays14.3430.0588.79116forward
CNT30610418Phaseolus vulgarisGossypium raimondii44.2537.2181.28358forward
CNT30205622Phaseolus vulgarisHelianthus annuus31.7795.1979.77257forward
CNT30129800Phaseolus vulgarisCorymbia citriodora47.9648.282.22388forward
CNT30360275Phaseolus vulgarisLactuca sativa35.664.4383.68288forward
CNT30570929Phaseolus vulgarisVitis vinifera55.1366.4781.17446forward
CNT3024772Phaseolus vulgarisPopulus trichocarpa33.9946.3781.45275forward
CNT30319826Phaseolus vulgarisAsparagus officinalis14.7120.2490.76119forward
CNT30174435Phaseolus vulgarisVigna angularis49.4459.793400forward
CNT30114697Phaseolus vulgarisEutrema salsugineum28.3137.3682.97229forward

Expression of CNT30526608

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MSPHSSCFSSFSYHHQLLPPSEASFLPLASSPPGTCPQPWTSSPPPASSPLASSLPLVPYLVQNLVL*

>peptide 2 (49 aa)
MVGGPRTQISNRINCSRTSELSNSLGTLGDSMFGQFSGQHKSDRSLDFP*

>peptide 3 (37 aa)
MFCSRTSELCNSLGTLRHSMFGQFSGQHESDRSLDFP*

Sequence

>CNT30526608
ATTTCAATACACAAAAGGATGTGACCAATCCTATTCCTTCAATTTAAACCATAAAAAATTGAACCTACTGATTTAAACCTAGGAACAGAACTTAGATCCA
CTAAATACAGCTTAAAAACATAAAGGGACCAAGGGCACAGATCAGCAATAAGATGTTTTGTTCAAGAACTAGTGAACTTTGTAACAGCCTTGGTACCCTC
AGACACAGCATGTTTGGCCAATTCTCCGGGCAGCACGAGTCTGACCGCAGTCTGGATTTCCCTTGAAGTGATGGTGGGGGGACCAAGAACACAGATCAGT
AATAGGATAAATTGTTCAAGAACTAGTGAACTTAGTAACAGCCTTGGTACCCTCGGAGACAGCATGTTTGGCCAATTCTCCGGGCAACACAAGTCTGACC
GCAGTCTGGATTTCCCTTGAAGTGATGGTGGGTTTCTTGTTATAGCGGGCAAGTCTAGAAGATTCCTGGGCAAGTTTCTCGAATATGTCGTTGATGAAAC
TGTTCATGATGCCCATGGCCTTGCTCGAGATACCAATGTCAGGGTGAACCTGCTTCAGAACCTTGAAGATGTAGATCTTGTATGTCTCCACATTCTTCTT
GTTTCTCTTCTTTTTCTTATCACCACCAGCTCCTCCCTCCTTCGGAAGCTTCTTTCCTGCCTTTGGCTTCTTCTCCGCCGGGGACTTGTCCCCAACCGTG
GACTTCTTCTCCTCCGCCGGCTTCTTCTCCGCTGGCTTCTTCTCTGCCTTTGGTGCCATATCTAGTGCAGAATTTGGTGCTCTGAAGAAAAATAGGGTTT
AGAATTGGG