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Detailed information on CNT30526451


BLAST search results

BLAST vs Swiss-Prot:
sp|P15192|CB22_PINSY, E-value = 1e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672010Phaseolus vulgarisSetaria viridis13.2123.7793.57140forward
CNT30520284Phaseolus vulgarisSetaria italica15.2820.3893.83162forward
CNT30640553Phaseolus vulgarisNymphaea colorata15.192089.44161forward
CNT30382112Phaseolus vulgarisManihot esculenta14.6229.4180.65155forward
CNT30387274Phaseolus vulgarisTriticum turgidum11.9828.3596.85127forward
CNT30236263Phaseolus vulgarisBrassica oleracea13.329.0184.4141forward
CNT30262014Phaseolus vulgarisBrassica rapa10.8525.0584.35115forward
CNT30132672Phaseolus vulgarisLolium perenne11.5121.8695.9122forward
CNT30360807Phaseolus vulgarisLactuca sativa12.6431.1685.82134forward
CNT3031825Phaseolus vulgarisTheobroma cacao1531.7481.76159forward
CNT30328621Phaseolus vulgarisAsparagus officinalis8.4930.291.1190forward
CNT30581381Phaseolus vulgarisEchinochloa crusgalli14.9156.8393.04158forward

Expression of CNT30526451

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MNPITRTSIQINVVIENGSGCPRYDDPSTSSTLNHAKHILNSSISFSHATSCNIFSKELNKIIPVNYRKTSVNKGFRSRYN*

>peptide 2 (39 aa)
MRFQEARPHEGGRGRCCCRCGGHELVLTCAVGGRELCLVE

Sequence

>CNT30526451
GCTTGATCTCTGCCAATTGAAGAGTGGCTTTCTTCTCTGGGTCTGAGGCCAAACCAAGAGGGTCGAAGTAGCTGCCACCAGGGTACAACCTCTTTTCTGG
GTCAAGCTCTGCGTTCCTCTGGAACTCAATGAACCCAATTACCAGAACCTCGATCCAGATCAATGTGGTGATTGAGAATGGAAGTGGTTGTCCAAGGTAC
GATGATCCTTCTACTAGCTCCACCTTAAACCATGCAAAACACATTCTAAATTCTTCAATATCATTCTCTCATGCTACTTCTTGTAATATTTTTTCTAAAG
AACTAAACAAAATTATCCCTGTTAATTATAGGAAAACTTCTGTCAACAAAGGTTTTAGATCTAGATACAATTAGGTCTTATGATTTAATATAAATTAATT
TTAGCAAGATCACTTTTAATTTCTCTTTTTTATTTTCATACCGAAGGATGTGAAGAATTTTCAAGCAAAGATCATCTAAAACTGCAATGGAAGGAAATGT
TTGATTGATATCTGGAGAAGAAGCAAGGGCAGAGAAGCGTACCTTGCCGGCGTCCTGCCATGTGACACCGGTGAGCCACTCGACGGTGAGGGCTCCGAGG
GTGGCGAGCATGGCCCAGCGTCCGTGGATGAGCTCGCACTCGCGGAACCTCTGGAGGCCGAAGACCTCGCTGTAGGGCTGGAAGGGAGTGGACTTCACGT
CTGCAACCTCGGTTCTGGTCCAGCGAGTCCAGCTCAAACTGCAAATACTCCGCGGGCTTTCCGAGCCCAAACGGGTCGAACCCGTAGTCCCCGATAAGGC
TCCCGTCAAGCCATTCTGGTGACTTCGCGCCGGGGTACCACAACGGCCTCTCGGTGCCCGAGCCCTTCGACACCTTCTTGGGCGCGGCCTTCTTCTTCGG
CCCGAACCCGAATCGGGCCTGGACCCGCCCCGACCCAGAATGCGCTTCCAGGAGGCGCGTCCCCATGAAGGAGGACGTGGCCGCTGCTGTTGCCGTTGCG
GTGGCCATGAGTTGGTGCTAACTTGCGCTGTGGGGGGGAGAGAGTTGTGCTTGGTAGAGT