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Detailed information on CNT30526368


BLAST search results

BLAST vs Swiss-Prot:
sp|P32290|CATA_VIGRR, E-value = 2e-86

BLAST vs NONCODE:
NONGMAT001767, E-value = 7e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674192Phaseolus vulgarisSetaria viridis4.0828.7687.6965forward
CNT30317874Phaseolus vulgarisCorylus avellana6.2240.5789.999forward
CNT30516671Phaseolus vulgarisJuglans regia14.1348.0884225forward
CNT3021611Phaseolus vulgarisCitrullus lanatus11.4345.8484.62182forward
CNT3070082Phaseolus vulgarisQuercus suber5.434.6884.8886forward
CNT30381388Phaseolus vulgarisManihot esculenta7.9821.7888.19127forward
CNT30405510Phaseolus vulgarisBeta vulgaris10.1134.2683.85161forward
CNT30708912Phaseolus vulgarisGlycine max18.9134.5695.02301forward
CNT3046375Phaseolus vulgarisPrunus dulcis20.6747.1382.67329forward
CNT30168584Phaseolus vulgarisPistacia vera12.573.4381.91199forward
CNT30398713Phaseolus vulgarisTriticum turgidum7.6644.8584.43122forward
CNT30563752Phaseolus vulgarisActinidia chinensis12.540.8683.92199forward
CNT3085325Phaseolus vulgarisVigna radiata12.882997.07205forward
CNT30668910Phaseolus vulgarisTriticum dicoccoides7.6643.4284.43122forward
CNT308572Phaseolus vulgarisZea mays6.636.2185.71105forward
CNT30654455Phaseolus vulgarisRosa chinensis23.1880.7482.38369forward
CNT30715065Phaseolus vulgarisMalus domestica golden23.8726.7280.26380forward
CNT30624929Phaseolus vulgarisDaucus carota4.7121.6886.6775forward
CNT30478285Phaseolus vulgarisArabidopsis halleri7.6635.2681.15122forward
CNT30368346Phaseolus vulgarisSorghum bicolor5.9735.1987.3795forward
CNT30359648Phaseolus vulgarisLactuca sativa7.5430.7785120forward
CNT30154060Phaseolus vulgarisPrunus persica20.6732.7781.76329forward
CNT30704838Phaseolus vulgarisPrunus avium10.4932.0584.43167forward
CNT3022569Phaseolus vulgarisPopulus trichocarpa17.5932.381.79280forward
CNT3038372Phaseolus vulgarisCucumis melo22.332.2779.44355forward
CNT3050211Phaseolus vulgarisCucumis sativus11.0646.8183.52176forward

Expression of CNT30526368

Peptides detected in this lncRNA

>peptide 1 (35 aa)
TKRPTGCKGIMSSGQVLVTSRGSKSNLSSCAGSIV*

>peptide 2 (46 aa)
MCDLKETLCTSSPGMDNTFWDPFPVKVCKLFHKMIILQENWTCQNG*

>peptide 3 (72 aa)
DQATNRLQGYNVLGPSFGYIKRVKVKFVFVCRIYCLNEQFPLRIVTSSNGIMKVLSSMAMVGSSHLNGLFLQ*

Sequence

>CNT30526368
GGACCAAGCGACCAACAGGCTGCAAGGGTATAATGTCCTCGGGCCAAGTTTTGGTTACATCAAGAGGGTCAAAGTCAAATTTGTCTTCGTGTGCAGGATC
TATTGTCTGAATGAACAGTTTCCACTCAGGATAGTTACCAGCAGCAATGGAATCATGAAGGTCTTGAGTAGCATGGCTATGGTTGGCTCCTCCCACCTTA
ATGGCCTCTTCCTCCAATAGACACTTCACACCACTCACGGTCTTCCAGTGAAATTTCACATACACTGCTTTCCCAGCCTTGCTGATCAAGGTATATGTGT
TAACTCCAAAACCATCCATATGCCTGTAATCTTGTGGAACACCCAAATCATCAAATAAAAAGGAGAACATGTGAAGGCTTTCCGGAAAGTGAGAAACGTC
ATGTGTGACCTCAAAGAAACCCTTTGCACTAGCTCCCCTGGCATGGACAACACGTTCTGGGATCCGTTCCCTGTCAAAGTTTGCAAGCTTTTCCACAAGA
TGATAATCCTCCAGGAGAATTGGACCTGCCAAAATGGATAAAATAACATAAATTTCCTCTTTTCTGATTAAATAATATTCATCCGAATTCAATCCAGCTA
TTCAACAGTGTGACAAACACATAATAAGCCACCATCCAATTGGCACCCTCGCAAAAGTATAGGAAAAGAAAAAACTGGAATTGACCGCCATATTCCTCCG
CAAATAAAAGACTCATAATATTTTTCCACGTAACTGTAACTACCATGTTGCAACATAGATAAGTGAAATCAAAGATTAAACTACACTTAGACATATACAA
TCTCTATGATAGAAATAGGGCAAAGAATGAATACATACTAGTACGATTCTATTTCGATAAACTTTTTCATGAATCCTAATAAGGAAAAAAATATGAAGGA
AAACTAAAGAAGTTTCTCCCACAAAACTCAAATTAACTTATGCATAAAATAAAATCAACTCTTGGAGAAACTAAATGATAGCACTTTTACAAATTAGTTA
ATGTATAAACTAATCTAAGCCAAAAAAAAAATCTCTTTTTTCGGGGAAAAAAGGATTTTAGCCTACTTTTGTTAAACATGATTAACATCCCAATATTTTC
AAAAATTGATGAATTTAGTCCTACATAGAGTTTAATTCCTCCGTTCTAAAATTCATCATTTTTCTAAAGTTAGGAGAATCTAAATTCAATTTTTTTTTAA
AGTTCGAAGACCAGATAGAAACGTACATGGACCTTGATCGCGTTCAACGGAATATTCAAGAACTAAAAACAATATTTTTCCTTTTTCCACCCATACATGC
TTATTGAAAAGTTTTTTCTGAACATGGCTTAGATGTTGCATTCTGAATATTCAGTGAACTGTAATTACCAAGGGTAGTAACTAACTACAAAAACCAGAGT
CAGCTATAGTCTACACATAGTCAGTCACATGGTCCACATGTCCTGCACTAATAGACCTTACAAAGCACAATAAAGCCCACAAAATTATATTATTTAAGAG
GATTCTACTTCGCTGGCATCAAAACAAGGGAAAGTTTAACAATTTTAGCAAACAAGAAATCACTCAAATGCGTGATTATGCAACAATTTCAG