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Detailed information on CNT3052623


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712448Amborella trichopodaGlycine max16.772088.2485forward
CNT30154413Amborella trichopodaPrunus persica17.9523.5186.8191forward

Expression of CNT3052623

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSHGSILSPLAPDPPCKLDVLRLVSSKRPTK*

Sequence

>CNT3052623
CATCACTAAATGGACGATGATAAAACAAATGGTTAAAATCAGCAACTAATTTAAACCAAAAGCATCATGCCAACACAAAACACCCATTGAAGAAAGCCAA
GTATCATCATCCTCAGTTCTCCCCATCAAGACTACACATACGTCACTGCAGAAGTATAAAGGAAACAGAATTAAAGCTAATGCCTATAGGGTAGTAGTAG
AATTATACATTCCCATGCACACACAAAAATAAATGAATCCCTACCAAATTAGTATAGATGACCTTCTATCTCATGAAATGAAAGCAACAGAAACATCAGT
AAGTCTTCTCTAGGAAATCAGAAACACCAGTAGCATAGGTCCATGGTAGAGAGATGAGCCATGGATCAATCCTAAGCCCTCTCGCCCCTGATCCTCCTTG
CAAGCTGGATGTCCTTAGGTTAGTATCCTCAAAGAGACCCACCAAGTAAGCCTCAGCTGCTTCTTGCAAGGCCAACACAGCATGGCTCTGGAAACGCAGA
TCAGTCT