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Detailed information on CNT30526134


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001022, E-value = 1e-81

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675624Phaseolus vulgarisSetaria viridis41.9242.3183.9267forward
CNT30517898Phaseolus vulgarisJuglans regia65.4646.0877.94417forward
CNT30378101Phaseolus vulgarisArabidopsis thaliana42.0730.3985.45268forward
CNT3019808Phaseolus vulgarisCitrullus lanatus44.5842.3987.32284forward
CNT30729348Phaseolus vulgarisCorchorus capsularis70.4949.6178.84449forward
CNT30379140Phaseolus vulgarisManihot esculenta76.357.7984.77486forward
CNT30402735Phaseolus vulgarisBeta vulgaris34.2216.0186.24218forward
CNT30630919Phaseolus vulgarisVigna unguiculata85.5640.9295.78545forward
CNT30712340Phaseolus vulgarisGlycine max23.3925.9186.58149forward
CNT30158908Phaseolus vulgarisPistacia vera75.229.3180.58479forward
CNT30636154Phaseolus vulgarisCapsicum annuum37.8352.1686.31241forward
CNT3094874Phaseolus vulgarisSolanum tuberosum48.8238.0287.78311forward
CNT30187977Phaseolus vulgarisSecale cereale46.474184.46296forward
CNT30394033Phaseolus vulgarisTriticum turgidum51.8124.3984.85330forward
CNT30566784Phaseolus vulgarisActinidia chinensis50.7142.586.07323forward
CNT30510227Phaseolus vulgarisSolanum lycopersicum75.5141.0886.69481forward
CNT30145670Phaseolus vulgarisMedicago truncatula22.9235.8790.41146forward
CNT30314068Phaseolus vulgarisCamelina sativa73.3130.885.22467forward
CNT3082269Phaseolus vulgarisBrassica juncea61.0760.0384.32389forward
CNT30606420Phaseolus vulgarisGossypium raimondii52.7558.8487.2336forward
CNT30652736Phaseolus vulgarisRosa chinensis45.6850.2686.25291forward
CNT30212755Phaseolus vulgarisHelianthus annuus29.5174.682.45188forward
CNT30625469Phaseolus vulgarisDaucus carota62.1726.4783.08396forward
CNT30688537Phaseolus vulgarisTriticum urartu14.4439.8386.9692forward
CNT30477326Phaseolus vulgarisArabidopsis halleri59.6542.9984.21380forward
CNT30362691Phaseolus vulgarisSorghum bicolor56.9936.783.47363forward
CNT30704690Phaseolus vulgarisPrunus avium83.9926.3385.05535forward
CNT3055928Phaseolus vulgarisAmborella trichopoda32.1823.3583.9205forward
CNT30323609Phaseolus vulgarisAsparagus officinalis72.8427.8782.54464forward
CNT30551470Phaseolus vulgarisOryza brachyantha5479.0883.72344forward
CNT30113681Phaseolus vulgarisFicus carica76.4566.979.26487forward

Expression of CNT30526134

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MTFRILFCCNISLEMLRGRSSESTIPLTKLRYSGINSSQLSMMKTLRTYSLMLLGFFLVSKISKGALLGIKRIALNSN*

>peptide 2 (32 aa)
MRHLLNFLLFLLLLLLILIDLFNLTLLFLLLFL

Sequence

>CNT30526134
CCTCAACAATTCAGCTAGCTTTGTCTTGTTCTGGGAATCCTCGTGAATACCCAATTTTAGGTTCTTAGAGAAGGCTTCGTAGAACTTGTTATAATCCTCC
TTGTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTAACCAAGTTCTTGCGGATGACCTTCAGGATCTTGTTTTGCTGCAACATTTCTCTGGAAA
TGTTGAGAGGAAGGTCCTCAGAATCCACAATACCCTTAACAAAGCTAAGGTACTCTGGAATCAACTCTTCACAGTTGTCCATGATGAAGACTCTGCGTAC
ATACAGTTTAATGTTGTTGGGCTTCTTCCTTGTGTCAAAGATATCAAAAGGTGCCCTCTTGGGGATAAAGAGGATAGCCTTAAACTCCAACTGACCCTCA
ACAGAGAAGTGCTTCACAGCCAAGTGTTCTTCCCAATCGTTGGTAAGACTCTTGTAGAAAGCAGCATATTCTTCTTTGTTAATCTCTTCAGGTTTCCTCA
TCCAGATAGGCTTCTGTTTGTTCACCAGAGACCACTCATGAGACACCTCCTTAATTTTCTTCTTTTTCTTCTCCTCCTTCTCCTTATCCTCATCGACCTC
TTCAACCTTACCCTCCTCTTCCTTCTTCTCTTCCTCA