Detailed information on CNT30526133


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST000006, E-value = 3e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Phaseolus vulgarisOryza sativa2210.9795.4544forward
CNT30512942Phaseolus vulgarisJuglans regia3814.9992.1176forward
CNT30631099Phaseolus vulgarisVigna unguiculata3812.2694.7476forward
CNT30712364Phaseolus vulgarisGlycine max36.518.3986.373forward
CNT30145759Phaseolus vulgarisMedicago truncatula37.519.7986.6775forward
CNT30204348Phaseolus vulgarisHelianthus annuus3823.984.2176forward
CNT30154320Phaseolus vulgarisPrunus persica3820.689.4776forward
CNT3022206Phaseolus vulgarisPopulus trichocarpa26.59.7490.5753forward

Expression of CNT30526133

Peptides detected in this lncRNA

>peptide 1 (45 aa)
FFFFSSFSLSSSTSSTLPSSSFFSSSSSSSEISFSVVFSIQREIG*

>peptide 2 (47 aa)
SSFSSPPSPYPHRPLQLYPPLPSSLPHPHHQKFPSQWSSQSREKLDN*

>peptide 3 (65 aa)
LLFLLLLLLILIDLFNFTLLFLLLFLILIIRNFLLSGLLNPERNWITDEFGMLLFVHQRPLMRHLL

Sequence

>CNT30526133
TCTTCTTTTTCTTCTCCTCCTTCTCCTTATCCTCATCGACCTCTTCAACTTTACCCTCCTCTTCCTTCTTCTCTTCCTCATCCTCATCATCAGAAATTTC
CTTCTCAGTGGTCTTCTCAATCCAGAGAGAAATTGGATAACTGATGAATTCGGAATGCTTCTGTTTGTTCACCAGAGACCACTCATGAGACACCTCCTTA