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Detailed information on CNT30526114


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501219Phaseolus vulgarisCoffea canephora29.9328.7189.0191reverse complement
CNT30272829Phaseolus vulgarisChenopodium quinoa30.2629.9788.0492forward
CNT30403856Phaseolus vulgarisBeta vulgaris50.665084.42154forward
CNT3046251Phaseolus vulgarisPrunus dulcis48.3648.8483.67147forward
CNT30587521Phaseolus vulgarisMusa acuminata27.325.3885.5483forward
CNT30612441Phaseolus vulgarisArabis alpina47.0446.4383.22143reverse complement
CNT30653438Phaseolus vulgarisRosa chinensis35.234.7485.98107forward
CNT30716661Phaseolus vulgarisMalus domestica golden35.234.5286.92107forward
CNT30625980Phaseolus vulgarisDaucus carota25.9925.988.6179forward
CNT30620685Phaseolus vulgarisCajanus cajan51.9716.5187.34158forward
CNT30354850Phaseolus vulgarisLactuca sativa22.048.4288.0667forward
CNT30154450Phaseolus vulgarisPrunus persica34.5434.4386.67105forward
CNT30706625Phaseolus vulgarisPrunus avium40.466.4383.74123forward
CNT3029804Phaseolus vulgarisTheobroma cacao48.6848.2183.11148forward
CNT3024632Phaseolus vulgarisPopulus trichocarpa35.5335.6486.11108forward
CNT30175046Phaseolus vulgarisVigna angularis83.2282.9587.75253forward

Expression of CNT30526114

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MASFGWALIAKCRPAHSKLRVEPWDLSEGLGFLVPKVEGTA*

Sequence

>CNT30526114
GCCGAGTTGGGTAACGCCAGCTTGTGACTCAGGTGAGGGCAATATGGTGGTGGGATAGAACTATGGCTTCATTTGGTTGGGCTTTGATTGCGAAATGCAG
GCCTGCCCACTCCAAGTTGAGAGTTGAACCATGGGACCTGAGCGAAGGCTTGGGTTTCTTGGTTCCTAAAGTGGAGGGCACAGCGTGAGGCTGGATTCAC
AGAGCAACGAAAACTTCCCTCTCCTGACAGTGGAGGGATAACAGGCTGCTGCATTCTCTACCCTGTATGCCTAATGAGTCTGGTTTCCTTAGACCATCAC
TTTT