Detailed information on CNT305261


BLAST search results

BLAST vs Swiss-Prot:
sp|P29250|LOX2_ORYSJ, E-value = 1e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440717Zea maysAegilops tauschii53.2633.2690.48147forward
CNT30721720Zea maysTriticum spelta56.8829.1892.36157forward

Expression of CNT305261

Peptides detected in this lncRNA

>peptide 1 (90 aa)
RVGVDVHGVTVVRQEELVHGVRHAELPVGGDHERLHHGVGVEPVADELVPAVVVHVGVGLGQVPHPRLRAGGRLGRVHGALGGGQAGLPRL

Sequence

>CNT305261
GCGCGTTGGAGTTGATGTTCATGGTGTCACGGTAGTGCGGCAGGAGGAGCTTGTGCACGGGGTGCGTCACGCTGAGCTGCCGGTTGGTGGCGATCACGAA
CGGCTCCATCACGGCGTGGGTGTTGAGCCAGTGGCTGATGAGCTGGTGCCAGCAGTAGTCGTTCACGTTGGCGTAGGCCTTGGCCAGGTGCCACACCCAC
GCCTCCGCGCCGGTGGTCGACTTGGGCGTGTACACGGTGCTCTTGGCGGTGGTCAGGCCGGACTCCCACGCCTCCG