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Detailed information on CNT30526024


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-145

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Phaseolus vulgarisNymphaea colorata67.9550.8283.87899forward
CNT30528288Phaseolus vulgarisEucalyptus grandis69.2468.3685.37916forward
CNT3019912Phaseolus vulgarisCitrullus lanatus68.7854.4685.49910forward
CNT30379426Phaseolus vulgarisManihot esculenta66.8276.3483.6884forward
CNT30712823Phaseolus vulgarisGlycine max51.1776.7688.04677forward
CNT3044330Phaseolus vulgarisPrunus dulcis68.2573.8384.27903forward
CNT30169912Phaseolus vulgarisPistacia vera68.6357.1184.69908forward
CNT30635990Phaseolus vulgarisCapsicum annuum69.4644.3384.98919forward
CNT3094992Phaseolus vulgarisSolanum tuberosum69.3978.8785.19918forward
CNT30171101Phaseolus vulgarisTrifolium pratense69.9255.6285.62925forward
CNT30147063Phaseolus vulgarisMedicago truncatula68.9383.0683.66912forward
CNT3077383Phaseolus vulgarisBrassica juncea69.6171.0683.5921forward
CNT30264722Phaseolus vulgarisBrassica rapa69.6187.0583.6921forward
CNT30228911Phaseolus vulgarisAnanas comosus67.5757.4284.34894forward
CNT30217449Phaseolus vulgarisKalanchoe fedtschenkoi68.6360.1785.13908forward
CNT3066849Phaseolus vulgarisLeersia perrieri68.9368.2683.66912forward
CNT30652253Phaseolus vulgarisRosa chinensis69.0170.3485.43913forward
CNT30716337Phaseolus vulgarisMalus domestica golden69.3974.0985.62918forward
CNT30623044Phaseolus vulgarisDaucus carota68.8646.284.52911forward
CNT30704857Phaseolus vulgarisPrunus avium68.6357.585.46908forward
CNT30643414Phaseolus vulgarisCannabis sativa66.3683.4683.37878forward
CNT30326890Phaseolus vulgarisAsparagus officinalis67.9572.8583.98899forward
CNT30150301Phaseolus vulgarisBrachypodium distachyon50.5747.3886.7669forward
CNT30116770Phaseolus vulgarisOryza nivara66.7463.1684.26883forward
CNT30603625Phaseolus vulgarisOryza punctata67.8868.583.52898forward
CNT30174705Phaseolus vulgarisVigna angularis85.3472.9888.571129forward
CNT30111662Phaseolus vulgarisFicus carica69.3967.985.62918forward
CNT30726149Phaseolus vulgarisLupinus angustifolius68.7847.7985.6910forward
CNT3050777Phaseolus vulgarisCucumis sativus64.187.3385.61848forward

Expression of CNT30526024

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MRRCWSGGIPSLSWILALTLSIVSELSTSRVMVFPVSVLTKICICRDKNQRRITSM*

>peptide 2 (31 aa)
MVSELSTSRVMVLPVRVLTKICIPPLRRRTR*

>peptide 3 (36 aa)
MLAAEYPSTKDGFVTKFDNINGTIQSNTNQIYLEGR*

>peptide 4 (31 aa)
MVSELSTSRVMVFPVRVFTKICMPPRRRRTR*

Sequence

>CNT30526024
ATGAATTTAGGATATATTATTTGGTGAAATGAGTAAAATGTTTATAATGATATGCTAGCTGCAGAGTATCCTTCAACAAAGGATGGATTCGTAACAAAGT
TCGATAATATCAACGGGACAATACAGTCCAACACAAACCAAATTTATTTAGAGGGTCGATAAAGACCCAATCCACATTTCAAATTTTAAAAGCCCCCACG
AAGACGCAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTTCTTCCATCCTCCAACTGCTTCCCTGCAAAGATCAACCTCTGC
TGGTCCGGTGGGATGCCCTCCTTGTCCTGAATTTTCGCCTTCACATTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTAATGGTCTTACCCGTAAGGG
TCTTGACGAAAATCTGCATTCCTCCCCTAAGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTCCCGTCCTCAAG
CTGCTTCCCAGCGAAGATCAACCTCTGCTGATCCGGGGGAATACCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCAATAGTGTCCGAACTCTCCACC
TCAAGAGTAATAGTCTTACCAGTGAGGGTCTTCACAAAGATCTGCATACCACCACGAAGACGCAACACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGT
AGTCGGCGAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGAC
GTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTCACAAAGATCTGCATGCCACCACGGAGACGGAGAACTAGG
TGAAGGGTTGATTCCTTTTGAATGTTGTAGTCGGCGAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGGGGGATTC
CTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGTGTCTTAACGAAGATCTG
CATCTGCAGAGATAAAAACCAGAGACGAATCACATCGATGTAATTAAACAGCTATCCAATTGAATCAAGTAAATCTCAAGAACAGATCTGGAGAGTTTCA
TGGAAAAAACATAATCTAGCTAAAAAAACAAACAACATAAGGCGGTTGTTAACAGATCTGAACAATTTCTTGAAAGAAAAAAGCTCTGTTAACGGATCTG
AACAATTTCTTGAAAGAAAAAAA