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Detailed information on CNT30525954


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 8e-159

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-129

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513318Phaseolus vulgarisJuglans regia62.1766.9385.48682forward
CNT30630785Phaseolus vulgarisVigna unguiculata62.7280.6696.22688forward
CNT30201346Phaseolus vulgarisPisum sativum59.863.5787.2656forward
CNT30710308Phaseolus vulgarisGlycine max63.7275.6587.7699forward
CNT3044338Phaseolus vulgarisPrunus dulcis59.862.386.13656forward
CNT3089456Phaseolus vulgarisVigna radiata72.4753.4393.58795forward
CNT30238974Phaseolus vulgarisBrassica oleracea62.4460.6283.8685forward
CNT3077671Phaseolus vulgarisBrassica juncea63.1771.2285.57693forward
CNT30153569Phaseolus vulgarisPrunus persica61.6274.9485.36676forward
CNT3021694Phaseolus vulgarisPopulus trichocarpa63.1771.5283.69693forward
CNT30726539Phaseolus vulgarisLupinus angustifolius62.1771.7186.51682forward

Expression of CNT30525954

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MRRCWSGGIPSLSWILALTLSIVSELSTSRVMVFPVSVLTKICICRDKNQRRITSM*

>peptide 2 (31 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRRTR*

>peptide 3 (36 aa)
MLAAEYPSTKDGFVTKFDNINGTIQSNTNQIYLEGR*

Sequence

>CNT30525954
GCATGAATTTAGGATATATTATTTGGTGAAATGAGTAAAATGTTTATAATGATATGCTAGCTGCAGAGTATCCTTCAACAAAGGATGGATTCGTAACAAA
GTTCGATAATATCAACGGGACAATACAGTCCAACACAAACCAAATTTATTTAGAGGGTCGATAAAGACCCAATCCACATTTCAAATTTTAAAAGCCCCCA
CGAAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAACCTCT
GCTGATCCGGGGGAATACCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCAATAGTGTCCGAACTCTCCACCTCAAGAGTAATAGTCTTACCAGTGAG
GGTCTTCACAAAGATCTGCATACCACCACGAAGACGCAACACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGGCGAGGGTCCTTCCATCCTCC
AGCTGTTTTCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGTATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCCA
CCTCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTCACAAAGATCTGCATGCCACCACGGAGACGGAGAACCAGGTGAAGGGTTGATTCCTTTTGAATGTT
GTAGTCGGCGAGGGTGCGCCCATCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTG
ACGTTGTCAATAGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGTGTCTTAACGAAGATCTGCATCTGCAGAGATAAAAACCAGAGAC
GAATCACATCGATGTAATTAAACAGCTATCCAATTGAATCAAGTAAATCTCAAGAACAGATCTGGAGAGTTTCATGGAAAAAACATAATCTAGCTAAAAA
AACAAACAACATAAGGCGGTTGTTAACAGATCTGAACAATTTCTTGAAAGAAAAAAGCTCTGTTAACGGATCTGAACAATTTCTTGAAAGAAAAAAA