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Detailed information on CNT30525798


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673704Phaseolus vulgarisSetaria viridis32.7743.193.68253reverse complement
CNT30177674Phaseolus vulgarisSecale cereale32.7712.4694.07253forward
CNT30298834Phaseolus vulgarisTriticum aestivum32.7754.4194.47253forward
CNT30221081Phaseolus vulgarisHordeum vulgare32.7712.4994.07253reverse complement
CNT30394116Phaseolus vulgarisTriticum turgidum32.7761.1193.28253reverse complement
CNT30538116Phaseolus vulgarisBrassica napus21.3713.6196.36165reverse complement
CNT30555411Phaseolus vulgarisOryza glaberrima21.541.1995.78166forward
CNT3017925Phaseolus vulgarisZea mays32.7722.1795.26253reverse complement
CNT3067405Phaseolus vulgarisLeersia perrieri31.0957.9791.67240reverse complement
CNT30647597Phaseolus vulgarisRosa chinensis26.8140.5993.24207reverse complement
CNT30203328Phaseolus vulgarisHelianthus annuus32.2530.2694.78249reverse complement
CNT30371139Phaseolus vulgarisOryza glumipatula29.9246.6794.81231forward
CNT30409295Phaseolus vulgarisPapaver somniferum32.2544.0795.58249reverse complement
CNT30149641Phaseolus vulgarisBrachypodium distachyon32.7712.5594.86253reverse complement
CNT30102660Phaseolus vulgarisOryza rufipogon31.8765.7892.68246reverse complement
CNT30604605Phaseolus vulgarisOryza punctata23.4578.3592.82181forward

Expression of CNT30525798

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MGIYLYGTLLTTQLSPNCSFRTCLRIIIYLNILN*

>peptide 2 (58 aa)
LVGLLPSRGIALSGFRPLRKISHCCLPWSLGRVSVPVWLIILSDQLLIIALVSYCLTN*

>peptide 3 (90 aa)
TRRPSTFTRHCSVRLSPIAENFPLLPPVESGSCLSPSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCSSAYRVLAAVSAFEGG*

Sequence

>CNT30525798
GACTCGTAGGCCTTCTACCTTCACGCGGCATTGCTCTGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCACTGCTGCCTCCCGTGGAGTCTGGGTCGTGT
CTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGTTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC
CTCGGGCGGATTCCTCCTTTTGCTCCTCAGCCTACCGAGTATTAGCAGCCGTTTCCGCATTCGAAGGGGGGTAGACTACTCAAGAATCTTACTTTCTTAT
AAGGCAAAAATATCCATAAAACTATTGTCTTCAACACTTAATGATCGATCAATTCTAGTTTCTATGATACTTTATATCTTAGTTTCAGTCTATATCTACG
TCTTAGTCTAGTTTAATGTTGGTTATAAGTCTTGATCTCAATCTGGTTTAATTTCAATGGGGTATCTACAATCACCCAAATGCTTAAGTCAGTGTAATCT
TGATATTTAAAAGTAGACAATTATAAGTCACTCAAAAGTGTTTTTACCTAAGGATATCCCCTTTTTATACTAGTTTTAATGGGCATATACTTATATGGAA
CTTTGCTAACGACCCAACTAAGTCCTAATTGCAGTTTTAGGACGTGCTTACGAATAATCATCTACTTAAACATTCTTAATTAGTTAGGGGGAACATGTCA
GTTAAACATGTTAGGATATGATTATTTAATTGAAATGTATGTCATTCGTTGGAGATTACTTTAGCTGTTCTT