Detailed information on CNT30525755


BLAST search results

BLAST vs Swiss-Prot:
sp|O80340|ERF78_ARATH, E-value = 7e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30170564Phaseolus vulgarisPistacia vera20.037.7585140forward
CNT30564047Phaseolus vulgarisActinidia chinensis16.8820.6785.59118forward
CNT30585986Phaseolus vulgarisMusa acuminata23.0323.7181.37161forward
CNT30572283Phaseolus vulgarisVitis vinifera25.0437.0884175forward
CNT3022992Phaseolus vulgarisPopulus trichocarpa20.0322.3384.29140forward
CNT3051215Phaseolus vulgarisCucumis sativus21.3224.5181.21149forward

Expression of CNT30525755

Peptides detected in this lncRNA

>peptide 1 (86 aa)
EKQKSKLKKKNSRVSDSGSGHLLWRRVVKVKIENSRTVPLNIAFAVVQIDHGGRVGVARRRVELTRRNGMLIVAKPKATWTAQTGA*

>peptide 2 (43 aa)
MEEGNWSWPWGRETRERRRRRHAPLPPPYRRCRAKRGSSCRDL*

Sequence

>CNT30525755
CCGAAAAACAAAAATCAAAATTAAAAAAAAAAAACTCAAGGGTGTCAGATTCCGGATCAGGCCATCTCCTGTGGAGGAGGGTGGTTAAGGTCAAGATCGA
AAATTCTAGAACCGTTCCCCTTAACATCGCCTTCGCTGTGGTTCAGATCGATCACGGAGGACGAGTCGGAGTCGCTCGTCGTCGCGTGGAACTCACTCGC
CGCAACGGGATGCTGATTGTAGCCAAACCCAAAGCCACGTGGACCGCCCAAACCGGCGCGTAGGACAGCGTCGAAGTACAAAACCTGGTTGGCCGCCGCC
GGGAAAACGGGAAACTGTTGCTGGAAGGGGAAGCGTGCAGCGGAGATCGCGGCTGGGGCGAGGTTGAGGGCTGGCGTTCTTGACATTATTATCGGATGGA
GGAGGGAAATTGGTCTTGGCCTTGGGGCCGCGAAACTCGCGAGCGGCGGCGTCGTAGGCACGCGCCGCTTCCTCCGCCGTATCGAAGGTGCCGAGCCAAA
CGCGGCTCTTCTTGCCGGGATCTCTAATCTCAGCGGCGTATCTCCCCCAGGGCCTCTTCCTGACTCCTCGAAAATGCGCCTCCTTGACTCCGGCGTTACC
GTTAGTGTTAACCTTAACGGCAGTGGTCTTGTCCCTGGGAGCCATAATAGCTTTGATTGAATTTAATTTTGGTTTGTGTGAGAGAGTGAGAAGAGAGAG