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Detailed information on CNT30525538


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628539Phaseolus vulgarisVigna unguiculata83.8463.1688.8384forward
CNT30711539Phaseolus vulgarisGlycine max43.2331.5389.9198forward
CNT30163346Phaseolus vulgarisPistacia vera20.3114.0594.6293forward
CNT3085016Phaseolus vulgarisVigna radiata87.9957.4989.33403forward
CNT30609975Phaseolus vulgarisGossypium raimondii16.5920.0592.1176forward
CNT3067939Phaseolus vulgarisLeersia perrieri14.6323.2695.5267reverse complement
CNT30621254Phaseolus vulgarisCajanus cajan36.6830.5589.88168forward
CNT30175235Phaseolus vulgarisVigna angularis88.4364.0889.88405forward

Expression of CNT30525538

Peptides detected in this lncRNA

>peptide 1 (31 aa)
GFCRHRFTFRIIFCRKSTSLREKPESFRCSR*

>peptide 2 (29 aa)
MAFWVVARMIMRSSWEGRRISRLSLASMH*

Sequence

>CNT30525538
GGGTTTTTGTCGCCACAGGTTCACATTCAGGATCATCTTCTGCAGAAAATCGACATCTTTGAGAGAAAAGCCTGAGAGTTTTCGTTGTTCAAGATGAGAG
CTAAGTGGAAGAAGAAGCGCATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGACAAAGATCTAAGTAGGTGCTTGATCAGGAGTCAGATGAGCTTTC
CTTCCTATCTTCATGGCATTTTGGGTTGTGGCTCGAATGATCATGAGATCTAGTTGGGAGGGGAGGCGTATCTCACGACTCAGTTTAGCATCAATGCATT
AAGACTATTGAGTGGGTTAAGTTATGATGAGTGTTTTTATGGAATCTAATTATGTACTGTTTTTGTATACTTCCTGGTTTACCCGAATAGCTTATATATA
TTATTAGTAGTATTTTATTTTATGAGTTACCTGAAATTTATCATTTTATAGAGATGCC