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Detailed information on CNT30525464


BLAST search results

BLAST vs Swiss-Prot:
sp|P25698|EF1A_SOYBN, E-value = 9e-101

BLAST vs NONCODE:
NONGMAT001702, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691950Phaseolus vulgarisOryza sativa103.1937.0282.85583forward
CNT30677701Phaseolus vulgarisSetaria viridis103.1985.1182.16583forward
CNT30521187Phaseolus vulgarisSetaria italica103.1944.7482.68583forward
CNT30639730Phaseolus vulgarisNymphaea colorata86.3753.181.35488forward
CNT30535563Phaseolus vulgarisEucalyptus grandis100.7169.7382.95569forward
CNT30316757Phaseolus vulgarisCorylus avellana102.6548.4184.14580forward
CNT30546799Phaseolus vulgarisIpomoea triloba103.1947.4882.33583forward
CNT30518094Phaseolus vulgarisJuglans regia102.6561.9782.07580forward
CNT30371709Phaseolus vulgarisArabidopsis thaliana100.7188.3581.2569forward
CNT30618435Phaseolus vulgarisSesamum indicum49.3856.8284.59279forward
CNT30272277Phaseolus vulgarisChenopodium quinoa55.5871.0485.99314forward
CNT3021172Phaseolus vulgarisCitrullus lanatus71.8677.3385.71406forward
CNT30727591Phaseolus vulgarisCorchorus capsularis98.7620.6787.46558forward
CNT30380230Phaseolus vulgarisManihot esculenta103.1924.0382.5583forward
CNT30629544Phaseolus vulgarisVigna unguiculata69.251.7295.4391forward
CNT30194937Phaseolus vulgarisPisum sativum102.8358.1681.93581forward
CNT30712080Phaseolus vulgarisGlycine max39.2930.6691.89222forward
CNT30160120Phaseolus vulgarisPistacia vera103.1946.983.88583forward
CNT30287202Phaseolus vulgarisTriticum aestivum60.8847.8483.43344forward
CNT30224987Phaseolus vulgarisHordeum vulgare50.2796.2784.86284forward
CNT30387246Phaseolus vulgarisTriticum turgidum73.8136.2383.69417forward
CNT30564256Phaseolus vulgarisActinidia chinensis103.1950.0982.16583forward
CNT3084119Phaseolus vulgarisVigna radiata72.0422.8794.84407forward
CNT30541591Phaseolus vulgarisBrassica napus103.1949.5781.65583forward
CNT30233993Phaseolus vulgarisBrassica oleracea101.7753.5481.74575forward
CNT30509820Phaseolus vulgarisSolanum lycopersicum39.6510086.16224forward
CNT30173274Phaseolus vulgarisTrifolium pratense103.1943.3582.85583forward
CNT30146334Phaseolus vulgarisMedicago truncatula83.3647.3882.59471forward
CNT30440878Phaseolus vulgarisAegilops tauschii30.6222.0187.86173forward
CNT30246955Phaseolus vulgarisAvena sativa103.1933.0382.33583forward
CNT30665783Phaseolus vulgarisTriticum dicoccoides99.2961.5885.38561forward
CNT30310418Phaseolus vulgarisCamelina sativa101.2449.3180.77572forward
CNT3059458Phaseolus vulgarisArabidopsis lyrata101.2445.5480.77572forward
CNT3077051Phaseolus vulgarisBrassica juncea103.1950.5282.68583forward
CNT30265127Phaseolus vulgarisBrassica rapa46.9103.9282.64265forward
CNT30614135Phaseolus vulgarisArabis alpina103.1937.3782.5583forward
CNT30598511Phaseolus vulgarisFraxinus excelsior63.3654.9986.03358forward
CNT30449495Phaseolus vulgarisSaccharum spontaneum103.1947.981.65583forward
CNT3011166Phaseolus vulgarisZea mays103.1941.2382.33583forward
CNT30608730Phaseolus vulgarisGossypium raimondii52.5749.587.88297forward
CNT30651330Phaseolus vulgarisRosa chinensis29.0337.1989.63164forward
CNT30127375Phaseolus vulgarisCorymbia citriodora55.7556.4585.08315forward
CNT30624959Phaseolus vulgarisDaucus carota58.2396.7686.02329forward
CNT30685098Phaseolus vulgarisTriticum urartu72.0427.6986407forward
CNT30350898Phaseolus vulgarisEragrostis tef103.1952.3382.68583forward
CNT30480841Phaseolus vulgarisArabidopsis halleri66.0260.0682.57373forward
CNT30368770Phaseolus vulgarisSorghum bicolor103.1981.4281.82583forward
CNT30355521Phaseolus vulgarisLactuca sativa66.5539.4186.17376forward
CNT30151899Phaseolus vulgarisPrunus persica54.1627.7486.27306forward
CNT30427756Phaseolus vulgarisPapaver somniferum101.7744.181.57575forward
CNT30706337Phaseolus vulgarisPrunus avium70.4434.1385.93398forward
CNT3052982Phaseolus vulgarisAmborella trichopoda60.5326.1586.84342forward
CNT3024428Phaseolus vulgarisPopulus trichocarpa86.3763.9680.94488forward
CNT3037774Phaseolus vulgarisCucumis melo71.8652.5285.96406forward
CNT30148140Phaseolus vulgarisBrachypodium distachyon48.1471.5883.46272forward
CNT30100761Phaseolus vulgarisOryza rufipogon59.8258.9985.21338forward
CNT30579541Phaseolus vulgarisEchinochloa crusgalli48.547.5785.4274forward
CNT30496874Phaseolus vulgarisDigitaria exilis103.3652.183.22584forward
CNT30116111Phaseolus vulgarisOryza nivara39.8225.7187.56225forward
CNT30594462Phaseolus vulgarisEragrostis curvula103.1950.0982.68583forward
CNT30603788Phaseolus vulgarisOryza punctata103.1949.4983.19583forward
CNT30176122Phaseolus vulgarisVigna angularis99.2949.5696.61561forward
CNT30113122Phaseolus vulgarisFicus carica69.3847.2384.18392forward
CNT30724026Phaseolus vulgarisLupinus angustifolius102.6540.2883.62580forward
CNT3050294Phaseolus vulgarisCucumis sativus71.8666.2387.19406forward

Expression of CNT30525464

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MMHLHRLNFSCQSRWCKSHHHTRLDDTSLNTSHRHSSNSSNLVNILKRKPERLVRWPLGLRDLVKCIKQGRSLVPVEVCGPLNHVVSLKT

>peptide 2 (70 aa)
KSSITILQELRLLLELFARSPVNLGHKFSKLDSNVGGVAIQNRGIAISNLTRVVKLAASLAGSSLEFEAT*

>peptide 3 (44 aa)
NPASPFFKNLGSFSSSLPDRLSILVISSANLTAMWEVWQSRTGA*

Sequence

>CNT30525464
AAATCCAGCATCACCATTCTTCAAGAACTTAGGCTCCTTCTCGAGCTCTTTGCCAGATCGCCTGTCAATCTTGGTCATAAGTTCAGCAAACTTGACAGCA
ATGTGGGAGGTGTGGCAATCCAGAACAGGGGCATAGCCATTTCCAATCTGACCAGGGTGGTGAAGTTAGCAGCCTCCTTGGCAGGATCATCCTTGGAGTT
TGAAGCAACATAACCACGCTTGAGATCCTTAACAGCAACATTCTTCACATTGAACCCCACGTTGTCACCGGGGAGAGCCTCTGTGAGAGCTTCATGATGC
ATCTCCACAGACTTAACTTCAGTTGTCAGTCCAGATGGTGCAAAAGTCACCACCATACCAGGCTTGATGACACCAGTCTCAACACGTCCCACAGGCACAG
TTCCAATTCCTCCAATCTTGTAAACATCCTGAAGAGGAAGCCTGAGAGGCTTGTCAGATGGCCTCTTGGGCTCAGAGATCTGGTCAAGTGCATCAAGCAA
GGTAGGTCCCTTGTACCAGTCGAGGTTTGTGGACCTCTCAATCATGTTGTCTCCCTCAAAACCAG