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Detailed information on CNT30525458


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01667|CAB6_ARATH, E-value = 9e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515355Phaseolus vulgarisJuglans regia11.6934.4787.74212forward
CNT30375299Phaseolus vulgarisArabidopsis thaliana5.8427.1184.91106forward
CNT30405492Phaseolus vulgarisBeta vulgaris3.5827.3187.6965forward
CNT30629575Phaseolus vulgarisVigna unguiculata8.4937.5697.4154forward
CNT30708472Phaseolus vulgarisGlycine max7.3931.3194.03134forward
CNT30567058Phaseolus vulgarisActinidia chinensis5.0725.5685.8792forward
CNT30588696Phaseolus vulgarisMusa acuminata6.6244.6185120forward
CNT30609040Phaseolus vulgarisGossypium raimondii10.0339.5784.62182forward
CNT30478064Phaseolus vulgarisArabidopsis halleri4.9128.1685.3989forward
CNT30360105Phaseolus vulgarisLactuca sativa12.6226.0279.91229forward
CNT3034379Phaseolus vulgarisTheobroma cacao13.0730.3883.97237forward
CNT3058384Phaseolus vulgarisAmborella trichopoda10.3639.4181.91188forward
CNT3037808Phaseolus vulgarisCucumis melo12.463184.96226forward
CNT30580151Phaseolus vulgarisEchinochloa crusgalli9.5432.8380.35173forward
CNT30497042Phaseolus vulgarisDigitaria exilis9.4321.5179.53171forward
CNT30725213Phaseolus vulgarisLupinus angustifolius8.635.1487.82156forward

Expression of CNT30525458

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MFLLESYKRESKTLISKETLTTASMAHLQ*

>peptide 2 (30 aa)
MLLWCSTKEMARNSMTRMVGSVPHGTGLPR*

>peptide 3 (34 aa)
MHVSARILQKRKQNSYFKRDTYNSKHGPSAVNEF*

>peptide 4 (34 aa)
FQNIIIESIITAQGTNIARSDSLQIVTWSYTSRC*

>peptide 5 (83 aa)
MSSDSLNLSRFSGTSPRPRGSNPKSLKQKKENTTCIMHKSTSKQKPFKITNLPLAHQSDFFHHQSVFNFLTFNFCILIKPMYF*

>peptide 6 (63 aa)
MELGCLGRWLAPLELQPIPEPLPSFLTPMPLEPKSLAAPKYKRFQHTKVVLFSSSKYWDNRKE*

>peptide 7 (45 aa)
MENLEEALVPKLEMGTEEANLDFEEESKEGKAVIAELINVLAAIF*

Sequence

>CNT30525458
TTTCAAAACATAATAATTGAAAGTATAATCACTGCACAGGGTACCAACATAGCCAGATCTGATTCATTACAAATTGTTACATGGAGTTATACAAGTAGGT
GCTAGAACAAATATTGGTTTTTTCAAGGCGAAATCGATTGTGGAATAACGATGTTTCCAATGTTGTTGTGCCATGGGTCAGCCAAGTGAGTAGCCAAGTT
CTCCAAAGGATCAAAAGCACCACCAGGGTATTTCTTCTTCTCTGGGTCTTTCTCCATGCTCCTTTGGTGCTCCACAAAGGAAATGGCAAGGAATTCAATG
ACCAGAATGGTGGGTAGTGTGCCCCATGGAACTGGGTTGCCTAGGTAGGTGGCTTGCCCCCCTGGAACTGCAGCCCATTCCTGAGCCTTTACCCAGTTTC
CTAACCCCAATGCCTCTGGAACCAAAATCCCTGGCTGCACCAAAATATAAGAGATTTCAGCATACTAAAGTAGTTCTGTTTTCTTCTTCTAAATATTGGG
ATAACAGAAAAGAATAGAAATGTTCTTAAGAATTTCTGATACACACTCTTATTAGATAAATGTGTTATTTCTAAACCTACAATTTTTAAACTTAAAATAC
AATTTTTAATAAGTACAAACTTATTATTATGCATATATTATAATTAAATGAACATGTGTTTTCATTTAGTTATATACACTGTCACTTGAGTGAACTACTT
GAAAAACATTTAGGATAATGAACATTTATAAAGGACTAAATGCATGTTTCTGCTAGAATCTTACAAAAGAGAAAGCAAAACTCTTATTTCAAAAGAGACA
CTTACAACAGCAAGCATGGCCCATCTGCAGTGAATGAGTTCTGACTCTTTGAACCTCTCAAGATTCTCTGGTACTTCACCAAGACCAAGAGGATCGAATC
CAAAGTCACTGAAACAAAAGAAAGAGAATACAACTTGCATTATGCACAAATCAACATCAAAACAAAAACCATTCAAAATCACTAATTTGCCTTTGGCACA
CCAAAGTGATTTTTTTCACCATCAATCTGTATTTAATTTTCTTACTTTCAACTTTTGCATTTTAATAAAACCAATGTACTTTTAAATCTTCCACTTAAAA
ATATATCAGTTTTAATTTGTAAATAAAATTTAATTTCGAGTAAATTCTTTAGGAGTTCGTATAGTTTATATGAGTGTCTGAGAACAAAGTCCCCTTCCAT
GTACACTGAATGCAACAAAATATGTTTAATTATGTTTTTAGTCTTTAAAATTTGGAGTTAATCTAATTTCAGTTTCTCAATTAAAAAAAAATCTTTAAAT
TTGAGAAAAGTTGTTTGAGTCCTAAGTTCTACTAAAATACTTTTCAAAATTGTTTTTAATTTCTAAACAGTAGATTTAAAGAATCAACCCTGTATTTTCA
AATTGAAAAGACTAGTTTTTGCAAACTTTGAGAAACTAAACTATATTCATCTAAAACAGTTCATAGTAAAAGTGTAGTTCAACAACAAAAGAACAATGTT
TTAAGAACACAAAACATGTTTGAAGTTAAGAATATTGTACTAAAGAAAAAGGGGAGAATATGTGGCATACCCTGGTGCTGAACCATCAAGGTAAGGGGGT
CTAGGTTGGCCAGGCATCCAGTCAGAAGTCATGGAAAACCTAGAAGAGGCATTGGTGCCAAAGCTGGAAATGGGAACTGAAGAGGCAAACCTTGATTTTG
AGGAAGAAAGTAAAGAAGGGAAGGCTGTGATAGCAGAGCTCATCAATGTGTTGGCAGCCATTTTTTGAGTGTGAAGAAGAGTTGTGAGAATTGGTGATGA
ATGATGCATTGGTG