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Detailed information on CNT30525291


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001024, E-value = 5e-132

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020302Phaseolus vulgarisCitrullus lanatus62.2867.1481.1799forward
CNT30124766Phaseolus vulgarisPhyscomitrium patens51.0571.1281.98655forward

Expression of CNT30525291

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVFPVRVFTNICIPPRSLNTKCRVDSFWML*

>peptide 2 (50 aa)
MPSLSWILAFTLSMVSELSTSKVMVFPVKVLTKICMPPLKRSTKWRVDSF*

>peptide 3 (33 aa)
ALVFHSFAELHTHTSLKKHKKNTQSRAATHEFN*

Sequence

>CNT30525291
GGCACTAGTTTTTCATTCTTTTGCTGAATTACACACACATACTAGTCTTAAAAAACATAAGAAAAACACCCAATCAAGAGCAGCAACACACGAGTTCAAT
TGACATTGGACAAAAGAGACATGATACTTAGAAACCACCGCGAAGACGAAGGACAAGGTGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTA
CGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATTGTAT
CAGAGCTCTCCACCTCCAATGTAATGGTCTTCCCTGTCAGGGTCTTCACAAATATTTGCATACCACCACGAAGTCGCAACACCAAGTGAAGAGTGGATTC
CTTCTGGATATTATAATCAGCAAGGGTACGCCCATCTTCCAGCTGCTTTCCGGCAAAGATAAGCCTCTGTTGATCTGGGTGGATTCCTTCTGAATGTTGT
AGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGCTTTCAC
ATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCATTCCACCACGAAGCCTCAACACTAAG
TGCAGAGTAGATTCCTTCTGGATGTTATAATCCGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAATATGAGCCTCTGCTGGTCTGGTGGGATGC
CTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATAGTGTCAGAGTTTTCAACCTCCAAAGTTATAGTCTTCCCAGTTAAAGTCTTCACAAAAATTTG
CATGCCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCCGCAAGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAAAA
ATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATGGTTT
TCCCGGTCAAAGTCTTGACAAAGATTTGCATGCCACCCCTTAAACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCGGCAAGGGTTCT
TCCATCCTCAAGTTGTTTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGGATACCCTCTTTGTCTTGGATCTTAGCTTTGA