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Detailed information on CNT30525249


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-123

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020365Phaseolus vulgarisCitrullus lanatus53.9646.0581.97804forward
CNT30628953Phaseolus vulgarisVigna unguiculata37.3874.9795.51557forward

Expression of CNT30525249

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MVSDDSTSRVMVLPVKVFTNICICTITNQSIRTETYVDTTVKSQNPKSSRNKQKKMKIENPN*

>peptide 2 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVKVLTKICMPPLRRSTRWRVDSFWIL*

>peptide 3 (37 aa)
MVSELSTSKVMVFPVKVLTKICMPPLKRSTKWRVDSF*

>peptide 4 (33 aa)
ALVFHSFAELHTHTSLKKHKKNTQSRAATHEFN*

>peptide 5 (33 aa)
MLIKLAYLRIEKQLHESRFNDDKSRQHRYNIQN*

>peptide 6 (71 aa)
MKSGFLLDVIISKGTPIFQLLPSKDKPLLVWWNPLFVLYLCLYIINGIGTFNLQSNGFPGQSLDKDLHATP*

Sequence

>CNT30525249
GGCACTAGTTTTTCATTCTTTTGCTGAATTACACACACATACTAGTCTTAAAAAACATAAGAAAAACACCCAATCAAGAGCAGCAACACACGAGTTCAAT
TGACATTGGACAAAAGAGACATGATACTTAGAAACCACCGCGAAGACGAAGGACAAGGTGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTA
CGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATTGTAT
CAGAGCTCTCCACCTCCAATGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATTTGCATTCCACCACGAAGCCTCAACACCAAATGAAGAGTGGATTC
CTTCTGGATGTTATAATCAGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGAATCCCCTCTTTGTCCTGT
ATCTTTGCCTTTACATTATCAATGGTATCGGAACTTTCAACCTCCAAAGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATGCCACCCCTTA
AACGAAGCACCAAGTGGAGGGTTGACTCCTTTTGAATATTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGCTTCCCAGCGAAAATCAGCCTCTGCTG
GTCTGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAGGTC
TTGACAAAGATTTGCATGCCACCCCTGAGGCGAAGCACGAGGTGGAGAGTGGATTCTTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTT
GCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGAGAGTGGATTCCTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGCTTACCC
GCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCTTTCACGTTATCAATGGTGTCAGACGATTCTACCTCGAGGGTTA
TGGTCTTGCCAGTCAAAGTTTTCACGAATATCTGCATCTGTACAATCACAAACCAATCCATAAGAACAGAGACATATGTAGACACTACAGTCAAATCACA
AAACCCTAAATCCTCAAGAAATAAACAGAAAAAAATGAAAATAGAAAACCCTAATTAGAATCGAATATTATGCTAATTAAACTCGCATATCTCAGAATCG
AAAAGCAATTGCATGAATCTAGATTCAACGATGATAAAAGCAGACAACACAGATACAACATTCAAAATTGAAAACATCGGAACGAGGATACGATGATTAA
TGAAGCCATAAGCAAAACCCATGAATTGAAGTTAATCCCATGAGGGTGAGGAAAAAGATGAGAAAGAGGGAGAAGAAAGAAAAGTACCTT