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Detailed information on CNT30525214


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-150

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629001Phaseolus vulgarisVigna unguiculata53.0784.1591.071030forward
CNT30124731Phaseolus vulgarisPhyscomitrium patens45.4976.8580.75883forward
CNT30311185Phaseolus vulgarisCamelina sativa56.1182.2581.821089forward

Expression of CNT30525214

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVMVFPVNVFTKICIPPRSLKTKCRVDSFWIL*

>peptide 2 (62 aa)
MVSDDSTSRVMVLPVKVFTNICICTITNQSIRTETYVDTTVKSQNPKSSRNKQKKMKIENPN*

>peptide 3 (33 aa)
ALVFHSFAELHTHTSLKKHKKNTQSRAATHEFN*

>peptide 4 (40 aa)
MVSELSTSKVMVFPVKVLTKICMPPLRRSTRWRVDSFWIL*

>peptide 5 (30 aa)
MVFPVRVFTNICIPPRSLNTKCRVDSFWML*

>peptide 6 (33 aa)
MLIKLAYLRIEKQLHESRFNDDKSRQHRYNIQN*

Sequence

>CNT30525214
GGCACTAGTTTTTCATTCTTTTGCTGAATTACACACACATACTAGTCTTAAAAAACATAAGAAAAACACCCAATCAAGAGCAGCAACACACGAGTTCAAT
TGACATTGGACAAAAGAGACATGATACTTAGAAACCACCGCGAAGACGAAGGACAAGGTGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTA
CGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATTGTAT
CAGAGCTCTCCACCTCCAATGTAATGGTCTTCCCTGTCAGGGTCTTCACAAATATTTGCATACCACCACGAAGTCGCAACACCAAGTGAAGAGTGGATTC
CTTCTGGATATTATAATCAGCAAGGGTACGCCCATCTTCCAGCTGCTTTCCGGCAAAGATAAGCCTCTGTTGATCTGGGTGGATTCCTTCTGAATGTTGT
AGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGCTTTCAC
ATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCATTCCACCACGAAGCCTCAACACTAAG
TGCAGAGTAGATTCCTTCTGGATGTTATAATCCGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAATATGAGCCTCTGCTGGTCTGGTGGGATGC
CTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATAGTGTCAGAGTTTTCAACCTCCAAAGTTATAGTCTTCCCAGTTAAAGTCTTCACAAAAATTTG
CATGCCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCAGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAG
ATAAGCCTCTGTTGATCTGGTGGTATGCCTTCCTTGTCCTGAATCTTTGCCTTCACATTATCGATGGTGTCAGAACTTTCAACCTCCAAAGTAATGGTCT
TTCCTGTCAACGTCTTTACAAAAATTTGCATTCCACCACGAAGCCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATATTATAATCCGCAAGGGTTCT
TCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTGTCT
GAACTCTCCACCTCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATGCCACCCCTGAGGCGAAGCACGAGGTGGAGAGTGGATTCCT
TTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAAT
CTTGGCTTTCACGTTATCAATGGTGTCAGACGATTCTACCTCGAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACGAATATCTGCATCTGTACAATCACA
AACCAATCCATAAGAACAGAGACATATGTAGACACTACAGTCAAATCACAAAACCCTAAATCCTCAAGAAATAAACAGAAAAAAATGAAAATAGAAAACC
CTAATTAGAATCGAATATTATGCTAATTAAACTCGCATATCTCAGAATCGAAAAGCAATTGCATGAATCTAGATTCAACGATGATAAAAGCAGACAACAC
AGATACAACATTCAAAATTGAAAACATCGGAACGAGGATACGATGATTAATGAAGCCATAAGCAAAACCCATGAATTGAAGTTAATCCCATGAGGGTGAG
GAAAAAGATGAGAAAGAGGGAGAAGAAAGAAAAGTACCTTG