« Back to Phaseolus vulgaris search


Detailed information on CNT30525213


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-159

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-90

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200687Phaseolus vulgarisPisum sativum72.6692.183.5606forward
CNT30712003Phaseolus vulgarisGlycine max79.9881.9489.81667forward
CNT30624140Phaseolus vulgarisDaucus carota82.6175.7182.44689forward
CNT30174484Phaseolus vulgarisVigna angularis56.7196.7391.54473forward

Expression of CNT30525213

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVKVLTKICMPPLRRSTRWRVDSFWIL*

>peptide 2 (34 aa)
ETRKIFLFDLQNTRVHYISLKHKQQYIHKQANEW*

>peptide 3 (96 aa)
MVRVQIKNTWTIKKSLEATAKAKDKVEGGFLLNVVVCQGATIFQLFPSKNKPLLIWWDALLVLNLCFHIINCIRALHLQGNGFPGQSLDKDLHATP*

Sequence

>CNT30525213
GTGAAACGAGAAAGATATTTTTATTTGATTTGCAAAACACACGAGTTCACTATATCAGTTTAAAACACAAACAGCAGTACATACACAAGCAAGCTAATGA
ATGGTAAGGGTACAAATAAAGAACACTTGGACAATTAAAAAAAGCTTAGAAGCCACCGCGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATG
TTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTTGCTT
TCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATGCCACCCCTTAAACGAAGCAC
CAAGTGGAGGGTTGACTCCTTTTGAATATTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGGG
ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGA
TTTGCATGCCACCCCTGAGGCGAAGCACGAGGTGGAGAGTGGATTCCTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGCTTACCCGC
AAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCTTTCACGTTATCAATGGTGTCAGACGATTCTACCTCGAGGGTTATG
GTCTTGCCAGTCAAAGTTTTCACGAATATCTGCA