Detailed information on CNT30525157


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001024, E-value = 3e-133

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30609009Phaseolus vulgarisGossypium raimondii71.1188.9982.8849forward

Expression of CNT30525157

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MPSLSWILALTLSMAKHEVESGFLLDIVIGKSATILELLTSENQPLLIRRDTFFVLDLSLDIINGVRGFHLEGDSFACQSFHKDL

>peptide 2 (37 aa)
MVSELSTSKVMVFPVKVLTKICMPPLKRSTKWRVDSF*

>peptide 3 (33 aa)
ALVFHSFAELHTHTSLKKHKKNTQSRAATHEFN*

>peptide 4 (75 aa)
MKSGFLLDVIISKGTPIFQLLPSKDKPLLVWWNPLFVLYLCLYIINGIGTFNLQSNGFSRQGLDKNLHATTKPQN*

>peptide 5 (37 aa)
MVSELSTSKVMVFPVKVLTKICMPPRSLKTKCKVDSF*

Sequence

>CNT30525157
GGCACTAGTTTTTCATTCTTTTGCTGAATTACACACACATACTAGTCTTAAAAAACATAAGAAAAACACCCAATCAAGAGCAGCAACACACGAGTTCAAT
TGACATTGGACAAAAGAGACATGATACTTAGAAACCACCGCGAAGACGAAGGACAAGGTGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTA
CGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATTGTAT
CAGAGCTCTCCACCTCCAATGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATTTGCATTCCACCACGAAGCCTCAACACCAAATGAAGAGTGGATTC
CTTCTGGATGTTATAATCAGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGAATCCCCTCTTTGTCCTGT
ATCTTTGCCTTTACATTATCAATGGTATCGGAACTTTCAACCTCCAAAGTAATGGTTTTTCCCGTCAAGGTCTTGACAAAAATTTGCATGCCACCACGAA
GCCTCAAAACTAAGTGCAAAGTGGACTCCTTCTGAATATTATAATCCGCCAGGGTTCTTCCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTG
GTCTGGGGGAATACCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATGGTTTTCCCGGTCAAAGTC
TTGACAAAGATTTGCATGCCACCCCTTAAACGAAGCACCAAGTGGAGGGTTGACTCCTTTTGAATATTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTT
GCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGCGAAGCACGAGGTGGAGAG
TGGATTCCTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGCTTACCAGCGAAAATCAGCCTCTGCTGATCCGGAGGGATACCTTCTTT
GTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGAGGATTCCACCTCGAGGGTGATAGTTTTGCCTGTCAAAGTTTTCACAAAGATCTGC