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Detailed information on CNT30525138


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001024, E-value = 5e-151

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629221Phaseolus vulgarisVigna unguiculata68.4487.2990.081119forward
CNT30120117Phaseolus vulgarisCitrus clementina41.2899.4184675forward

Expression of CNT30525138

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MVRVQIKNTWTIKKSLEATAKAKDKVEGGFLLNVVVCQGGGWILSECCSLPRCDHLPIVYQQK*

>peptide 2 (40 aa)
MVSELSTSKVMVFPVNVFTKICIPPRSLKTKCRVDSFWIL*

>peptide 3 (40 aa)
MVSELSTSKVMVFPVRVFTNICIPPRSLNTKCRVDSFWML*

>peptide 4 (37 aa)
MVSELSTSKVMVFPVKVFTKICIPPLKRSTRWRVDSF*

>peptide 5 (35 aa)
CETRKIFLFDLQNTRVHYISLKHKQQYIHKQANEW*

>peptide 6 (30 aa)
MVFPVRVFTNICIPPRSLNTRCRVDSFWML*

Sequence

>CNT30525138
TTTGTGAAACGAGAAAGATATTTTTATTTGATTTGCAAAACACACGAGTTCACTATATCAGTTTAAAACACAAACAGCAGTACATACACAAGCAAGCTAA
TGAATGGTAAGGGTACAAATAAAGAACACTTGGACAATTAAAAAAAGCTTAGAAGCCACCGCGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGA
ATGTTGTAGTCTGCCAAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATAAGCCTC
TGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCCCTGTCA
GAGTCTTCACAAATATCTGCATTCCACCACGAAGCCTCAACACCAGGTGCAGAGTGGATTCCTTCTGGATGTTATAATCAGCAAGGGTACGCCCATCTTC
CAGCTGCTTCCCAGCAAAGATAAGCCTCTGTTGATCTGGTGGTATGCCTTCCTTGTCCTGAATCTTTGCCTTCACATTATCGATGGTGTCAGAACTTTCA
ACCTCCAAAGTAATGGTCTTTCCTGTCAACGTCTTTACAAAAATTTGCATTCCACCACGAAGCCTCAAAACCAAGTGCAGAGTAGATTCTTTCTGGATAT
TATAATCCGCAAGGGTTCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCTTT
CACATTATCAATGGTGTCTGAACTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTCTTCACAAATATCTGCATTCCACCGCGAAGCCTCAACACT
AAGTGCAGAGTAGATTCCTTCTGGATGTTATAATCCGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAATATGAGCCTCTGCTGGTCTGGTGGGA
TGCCTTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATAGTGTCAGAGCTTTCAACCTCCAAAGTTATAGTCTCCCAGTTAAAGTTTTCACAAAAATT
TGCATGCCACCCCGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAATCCGCAAGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAA
AAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGT
CTTTCCAGTCAAAGTCTTCACAAAAATCTGCATACCACCTCTCAAACGAAGCACCAGGTGGAGGGTGGACTCCTTCTGAATATTATAATCGGCAAGGGTT
CTTCCATCCTCAAGTTGTTTACCAGCAAAAATCAGCCTCTGCTGATCTGGAGGGATACCCTCTTTGTCTTGGATCTTAGCTTTGACATTATCAATGGTGT
CAGACGATTCTACCTCGAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACGAATATCTGCATCTGTTCAATCAGAAACTAAAACATCAATAACATAGACAT
GTGTAGTATAGCCATAGTTCAACCACAAAACTCAT