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Detailed information on CNT30525132


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-163

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532219Phaseolus vulgarisEucalyptus grandis75.0871.1181.521196forward
CNT30316435Phaseolus vulgarisCorylus avellana47.9699.7483.38764forward
CNT30512897Phaseolus vulgarisJuglans regia51.9883.8983.21828forward
CNT3086449Phaseolus vulgarisVigna radiata92.0393.3288.341466forward
CNT30311152Phaseolus vulgarisCamelina sativa84.3183.2681.531343forward
CNT3073617Phaseolus vulgarisBrassica juncea71.9433.9380.891146forward

Expression of CNT30525132

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVKVLTKICMPPLRRSTRWRVDSF*

>peptide 2 (40 aa)
MVSELSTSKVMVFPVRVFTNICIPPRSLNTKCRVDSFWML*

>peptide 3 (37 aa)
MVSELSTSKVMVFPVKVLTKICMPPRSLKTKCKVDSF*

>peptide 4 (33 aa)
ALVFHSFAELHTHTSLKKHKKNTQSRAATHEFN*

>peptide 5 (75 aa)
MKSGFLLDVIISKGTPIFQLLPSKDKPLLVWWNPLFVLYLCLYIINGIGTFNLQSNGFSRQGLDKNLHATTKPQN*

>peptide 6 (50 aa)
MPSLSWILAFTLSMVSELSTSKVMVFPVKVLTKICMPPLKRSTKWRVDSF*

Sequence

>CNT30525132
GGCACTAGTTTTTCATTCTTTTGCTGAATTACACACACATACTAGTCTTAAAAAACATAAGAAAAACACCCAATCAAGAGCAGCAACACACGAGTTCAAT
TGACATTGGACAAAAGAGACATGATACTTAGAAACCACCGCGAAGACGAAGGACAAGGTGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTA
CGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATTGTAT
CAGAGCTCTCCACCTCCAATGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATTTGCATTCCACCACGAAGCCTCAACACCAAATGAAGAGTGGATTC
CTTCTGGATGTTATAATCAGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGAATCCCCTCTTTGTCCTGT
ATCTTTGCCTTTACATTATCAATGGTATCGGAACTTTCAACCTCCAAAGTAATGGTTTTTCCCGTCAAGGTCTTGACAAAAATTTGCATGCCACCACGAA
GCCTCAAAACTAAGTGCAAAGTGGACTCCTTCTGAATATTATAATCCGCCAGGGTTCTTCCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTG
GTCTGGGGGAATACCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATGGTCTTCCCTGTCAGAGTC
TTCACAAATATCTGCATTCCACCACGAAGCCTCAACACTAAGTGCAGAGTAGATTCCTTCTGGATGTTATAATCCGCAAGGGTACGCCCATCTTCCAGCT
GCTTCCCAGCAAATATGAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATAGTGTCAGAGTTTTCAACCTC
CAAAGTTATAGTCTTCCCAGTTAAAGTCTTCACAAAAATTTGCATGCCACCACGAAGCCTCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATGTTATAA
TCCGCAAGGGTTCTACCGTCTTCAAGCTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCTTTCACAT
TATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATGCCACCCCTTAAACGAAGCACCAAGTG
GAGGGTTGACTCCTTTTGAATATTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGAGGGATGCCC
TCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATTTGCA
TGCCACCCCTGAGGCGAAGCACGAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAG