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Detailed information on CNT30525128


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678495Phaseolus vulgarisSetaria viridis39.9143.3281.98172forward
CNT30522442Phaseolus vulgarisSetaria italica24.1312.7685.58104forward
CNT30641545Phaseolus vulgarisNymphaea colorata43.8522.2487.3189forward
CNT30513785Phaseolus vulgarisJuglans regia58.740.6881.42253forward
CNT30371574Phaseolus vulgarisArabidopsis thaliana59.6349.7179.38257forward
CNT30618119Phaseolus vulgarisSesamum indicum40.8434.3180.11176forward
CNT30273262Phaseolus vulgarisChenopodium quinoa42.9211.1879.46185forward
CNT3019440Phaseolus vulgarisCitrullus lanatus58.766.7581.42253forward
CNT30629169Phaseolus vulgarisVigna unguiculata38.7532.6894.01167forward
CNT30709011Phaseolus vulgarisGlycine max64.0430.489.49276forward
CNT3091235Phaseolus vulgarisSolanum tuberosum22.748.1882.6598forward
CNT30188078Phaseolus vulgarisSecale cereale40.618.0684175forward
CNT30298665Phaseolus vulgarisTriticum aestivum38.7525.8184.43167forward
CNT30224070Phaseolus vulgarisHordeum vulgare14.1527.3590.1661forward
CNT30394054Phaseolus vulgarisTriticum turgidum40.617.6984.57175forward
CNT30562388Phaseolus vulgarisActinidia chinensis42.2317.1282.97182forward
CNT3086376Phaseolus vulgarisVigna radiata96.2970.2291.81415forward
CNT30540068Phaseolus vulgarisBrassica napus59.434.8378.91256forward
CNT30664762Phaseolus vulgarisTriticum dicoccoides40.629.5184.57175forward
CNT30313614Phaseolus vulgarisCamelina sativa5864.4379.2250forward
CNT3075737Phaseolus vulgarisBrassica juncea24.8312.6282.24107forward
CNT30264705Phaseolus vulgarisBrassica rapa59.430.5178.91256forward
CNT308929Phaseolus vulgarisZea mays41.5359.4785.47179forward
CNT30716553Phaseolus vulgarisMalus domestica golden33.1821.7782.52143forward
CNT30623157Phaseolus vulgarisDaucus carota31.7913.8480.29137forward
CNT30684883Phaseolus vulgarisTriticum urartu38.7527.7484.43167forward
CNT30349302Phaseolus vulgarisEragrostis tef24.1318.7482.69104forward
CNT30620828Phaseolus vulgarisCajanus cajan32.4863.9388.57140forward
CNT3038681Phaseolus vulgarisCucumis melo50.8154.6179219forward
CNT30148341Phaseolus vulgarisBrachypodium distachyon21.8132.0882.9894forward
CNT30579105Phaseolus vulgarisEchinochloa crusgalli41.5316.9586.03179forward
CNT30174403Phaseolus vulgarisVigna angularis42.6926.4795.11184forward

Expression of CNT30525128

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MYRKRTPGVMNSPQCLWSPLTIRCGSPSAPSDRRMWCCCCRSCWGWQSRRWRGAVWSLVWGGGRLAWIDWWEL*

Sequence

>CNT30525128
CTTGAGAAGGGAATGAGTGGGGCTAGACATCCTTGGCAATGAGGTCACCGTTGATGAGCTCTCTGTAGGCAGCAACGGGCCAGCTGAACCCCCGGAAGAG
CAAACGAGAGGCCAGAGGAACGTCGATGATGATCTCCTTCATGGTAGGCTTTTTCTCATCCCTGATGGCAATAAGGTAACTCCGACCCACCCACCCGATC
CACCCGGCGATGTACAGAAAGAGGACCCCAGGAGTGATGAACTCGCCCCAGTGCCTCTGGTCTCCGCTCACGATCAGGTGCGGCAGCCCGTCGGCGCCTT
CAGATCGGAGGATGTGGTGTTGTTGTTGTCGGAGTTGTTGGGGGTGGCAGAGCAGACGATGGCGGGGCGCAGTTTGGAGCCTAGTTTGGGGCGGAGGGCG
GCTGGCTTGGATAGATTGGTGGGAATTGTGA