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Detailed information on CNT30525116


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-123

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406246Phaseolus vulgarisBeta vulgaris44.5698.9683.89664forward
CNT30490426Phaseolus vulgarisOlea europaea36.6447.8584.07546forward
CNT30572920Phaseolus vulgarisVitis vinifera51.3478.8781.44765forward

Expression of CNT30525116

Peptides detected in this lncRNA

>peptide 1 (33 aa)
ALVFHSFAELHTHTSLKKHKKNTQSRAATHEFN*

>peptide 2 (33 aa)
MLIKLAYLRIEKQLHESRFNDDKSRQHRYNIQN*

>peptide 3 (62 aa)
MVSDDSTSRVMVLPVKVFTNICICTITNQSIRTETYVDTTVKSQNPKSSRNKQKKMKIENPN*

>peptide 4 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVKVLTKICMPPLRRSTRWRVDSFWIL*

Sequence

>CNT30525116
GGCACTAGTTTTTCATTCTTTTGCTGAATTACACACACATACTAGTCTTAAAAAACATAAGAAAAACACCCAATCAAGAGCAGCAACACACGAGTTCAAT
TGACATTGGACAAAAGAGACATGATACTTAGAAACCACCGCGAAGACGAAGGACAAGGTGCAGGGTAGATTCCTTCTGAATATTGTAGTCTGCCAAGGTA
CGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTCACATTATCAATTGTAT
CAGAGCTCTCCACCTCCAATGTAATGGTCTTCCCTGTCAGGGTCTTCACAAATATTTGCATACCACCACGAAGTCGCAACACCAAGTGAAGAGTGGATTC
CTTCTGGATATTATAATCAGCAAGGGTACGCCCATCTTCCAGCTGCTTTCCGGCAAAGATAAGCCTCTGTTGATCTGGTGGTATGCCTTCCTTGTCCTGA
ATCTTTGCTTTCACATTGTCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATGGTTTTCCCGGTCAAAGTCTTGACAAAGATTTGCATGCCACCCCTTA
AACGAAGCACCAAGTGGAGGGTTGACTCCTTTTGAATATTGTAATCAGCAAGGGTTCTTCCGTCCTCAAGTTGCTTCCCAGCGAAAATCAGCCTCTGCTG
GTCTGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAGGTC
TTGACAAAGATTTGCATGCCACCCCTGAGGCGAAGCACGAGGTGGAGAGTGGATTCTTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTT
GCTTACCCGCAAAGATAAGTCTCTGCTGGTCAGGTGGAGAGTGGATTCCTTTTGGATATTGTAATCGGCAAGAGTGCGACCATCCTCGAGTTGCTTACCC
GCAAAGATAAGTCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCTTTCACGTTATCAATGGTGTCAGACGATTCTACCTCGAGGGTTA
TGGTCTTGCCAGTCAAAGTTTTCACGAATATCTGCATCTGTACAATCACAAACCAATCCATAAGAACAGAGACATATGTAGACACTACAGTCAAATCACA
AAACCCTAAATCCTCAAGAAATAAACAGAAAAAAATGAAAATAGAAAACCCTAATTAGAATCGAATATTATGCTAATTAAACTCGCATATCTCAGAATCG
AAAAGCAATTGCATGAATCTAGATTCAACGATGATAAAAGCAGACAACACAGATACAACATTCAAAATTGAAAACATCGGAACGAGGATACGATGATTAA
TGAAGCCATAAGCAAAACCCATGAATTGAAGTTAATCCCATGAGGGTGAGGAAAAAGATGAGAAAGAGGGAGAAGAAAGAAAAGTACCTT