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Detailed information on CNT30525072


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT002444, E-value = 2e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677409Phaseolus vulgarisSetaria viridis51.9949.0194.14222reverse complement
CNT30641660Phaseolus vulgarisNymphaea colorata53.6318.8999.13229forward
CNT30513443Phaseolus vulgarisJuglans regia53.6331.0798.25229reverse complement
CNT30378667Phaseolus vulgarisArabidopsis thaliana46.617.7898.49199reverse complement
CNT30381505Phaseolus vulgarisManihot esculenta20.6130.2495.4588reverse complement
CNT30202034Phaseolus vulgarisPisum sativum53.6313.4596.07229forward
CNT30503431Phaseolus vulgarisNicotiana attenuata53.6316.5899.13229forward
CNT30709956Phaseolus vulgarisGlycine max31.1529.6293.98133reverse complement
CNT3044711Phaseolus vulgarisPrunus dulcis36.0732.2999.35154forward
CNT30221722Phaseolus vulgarisHordeum vulgare99.343.2794.58424forward
CNT30588765Phaseolus vulgarisMusa acuminata39.3424.0799.4168forward
CNT3089856Phaseolus vulgarisVigna radiata26.9327.5199.13115forward
CNT30511396Phaseolus vulgarisSolanum lycopersicum47.7822.391.67204reverse complement
CNT30554009Phaseolus vulgarisOryza glaberrima47.3137.0694.06202reverse complement
CNT30437708Phaseolus vulgarisAegilops tauschii31.6243.2791.85135forward
CNT30664460Phaseolus vulgarisTriticum dicoccoides19.6723.296.4384reverse complement
CNT3062651Phaseolus vulgarisArabidopsis lyrata53.6327.5298.25229forward
CNT30266045Phaseolus vulgarisBrassica rapa37.736.3495.65161reverse complement
CNT30612440Phaseolus vulgarisArabis alpina24.8247.1193.4106reverse complement
CNT30141326Phaseolus vulgarisLolium perenne27.435.24100117reverse complement
CNT30715515Phaseolus vulgarisMalus domestica golden31.1566.1786.47133reverse complement
CNT30352524Phaseolus vulgarisEragrostis tef35.1335.891.33150forward
CNT30357533Phaseolus vulgarisLactuca sativa51.5221.6196.82220reverse complement
CNT30646402Phaseolus vulgarisCannabis sativa53.6318.195.63229forward
CNT3056240Phaseolus vulgarisAmborella trichopoda33.0249.398.58141reverse complement
CNT30103046Phaseolus vulgarisOryza rufipogon99.332.6294.81424forward
CNT30576679Phaseolus vulgarisOryza barthii48.0139.0596.59205reverse complement

Expression of CNT30525072

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLLGSERKLVMLSATGLSPSRVQHSMLLRLAARHLYSSPTTPFSRFM

>peptide 2 (54 aa)
MSSQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVDSDLHLVSPKLHPGHG*

>peptide 3 (61 aa)
LDLVPLSRPAPKQCFTPRCLVNCCASTHFGENQLALGSSGISPLTTTHPLILQHQSIRTST*

Sequence

>CNT30525072
CCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCTAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAG
CTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGATTCGGACCTCCACTTAGTTTCACCCAAGCT
TCATCCTGGTCATGGATAGATCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCA
GAGCGTAAGCTAGTGATGCTTTCGGCTACTGGACTTTCGCCATCTAGGGTGCAGCATTCTATGCTGCTTCGCCTAGCAGCACGACACTTGTATAGCTCTC
CCACAACCCCTTTTTCACGGTTTATGA