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Detailed information on CNT30524999


BLAST search results

BLAST vs Swiss-Prot:
sp|P08221|CB21_CUCSA, E-value = 2e-118

BLAST vs NONCODE:
NONVVIT000384, E-value = 1e-47

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629403Phaseolus vulgarisVigna unguiculata101.1175.9794.88547forward
CNT30562279Phaseolus vulgarisActinidia chinensis90.0260.9583.98487forward
CNT30129909Phaseolus vulgarisCorymbia citriodora99.457483.83538forward

Expression of CNT30524999

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (59 aa)
PQVILMVLTFRGRSWWRRPRRCCSLGRQGDRRGSPRDPFRSQWPGRRTRTWRTWPTYRS*

>peptide 3 (39 aa)
MAWTKNPNMENMANLPFLSSFTLSSAKASGSSARLGFPK*

Sequence

>CNT30524999
ATCCACAAGTCATTCTGATGGTGCTCACTTTCCGGGGACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTCACTGGGTCGGCAAGGTGATCGGCGAGG
TTCTCCAAGGGACCCTTTCCGGTCACAATGGCCTGGACGAAGAACCCGAACATGGAGAACATGGCCAACCTACCGTTCTTGAGTTCCTTCACCTTGAGCT
CAGCGAAAGCCTCTGGGTCGTCAGCGAGGCTTGGGTTTCCCAAGTAGTCGAGCCCACCCTCGCTGAAGATCTGGGAACCAGCTTTGAACCAGACGGCCTC
GCCGAATTTCACGCCGTTGCGGGACAGGAGTTCGGGGAAGACGCAGCCCAAGGCTCCGAGCATGGCCCACCTGGAGTGGATGACTTCCAGCTCACGGTTC
TTGGCGAAGGTTTCTGGGTCAGCGGAAAGCCCAGCAGTGTCCCAACCGTAGTCACCTGGGAACTCGCCGGTGAGGTAGGATGGGGCCTCGCCGGAGAATG
GGCCCAAGTACTTGACACGGTCTGGGCCGTACCATGGGCTT