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Detailed information on CNT30524977


BLAST search results

BLAST vs Swiss-Prot:
sp|P49440|CHSY_PHAVU, E-value = 3e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379505Phaseolus vulgarisManihot esculenta31.2129.0482.04167forward
CNT3022840Phaseolus vulgarisPopulus trichocarpa59.8132.8579.69320forward

Expression of CNT30524977

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVCAVQTNSNKGFSICGIGSEPTITAAAPS

Sequence

>CNT30524977
TGTCGTTTTAAGTCCATTTTCAACTGATTTCCTCCTCATCTCATCCAAGATGAATAGCACACATGCACTTGACATGTTCCCATAATTGCTAAGCACATCT
CTAGTGGCCTTCATCTTTTCAGCTGATTTCCTTCTCATCTCATCCAAGATGAAAAGCACACATGCACTTGACATGTTTCCGTAATCACTCAGCACATCTC
TAGTGGCCTTCATCTTTTCAGGTTTCAGACCCAATTTTTGCTCAACTTGGTCTAGAATTGCAGGTCCACCAGGGTGTGCGATCCAGAAGATGGAGTTGTA
ATCAGAGATGTTCAATGGGTTGAAGGCCTCAAAAAGTGCCTTTCCAATGTTCTTTGAGACAATCCCAGGAACATCCTTAAGGAGGTGAAACGTGAGTCCA
ACTTCACGAAGGTGGCCATCAATAGCACCATCACTGTCTGGAGCAATGGTCTGTGCAGTCCAAACCAACTCAAACAAAGGCTTCTCAATCTGTGGAATTG
GGTCAGAACCAACAATCACTGCAGCTGCTCCATCT