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Detailed information on CNT30524944


BLAST search results

BLAST vs Swiss-Prot:
sp|A4GYN8|RR12B_POPTR, E-value = 7e-45

BLAST vs NONCODE:
NONVVIT000515, E-value = 7e-109

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677883Phaseolus vulgarisSetaria viridis64.2642.991.88640forward
CNT3021516Phaseolus vulgarisCitrullus lanatus63.7634.5394.96635forward
CNT30730546Phaseolus vulgarisCorchorus capsularis16.2727.4196.3162forward
CNT30406883Phaseolus vulgarisBeta vulgaris13.5552.5390.37135forward
CNT30199301Phaseolus vulgarisPisum sativum11.2438.2391.96112reverse complement
CNT30492881Phaseolus vulgarisOlea europaea20.8832.2585.58208forward
CNT30710142Phaseolus vulgarisGlycine max43.7897.7696.33436forward
CNT30300194Phaseolus vulgarisTriticum aestivum64.2630.4291.72640forward
CNT30220990Phaseolus vulgarisHordeum vulgare23.1918.2386.15231forward
CNT30384312Phaseolus vulgarisTriticum turgidum24.65.6195.51245reverse complement
CNT30569656Phaseolus vulgarisActinidia chinensis17.1720.3195.32171forward
CNT3083498Phaseolus vulgarisVigna radiata18.5779.7499.46185reverse complement
CNT30509374Phaseolus vulgarisSolanum lycopersicum7.433793.2474forward
CNT3018229Phaseolus vulgarisZea mays22.4910094.64224reverse complement
CNT30610163Phaseolus vulgarisGossypium raimondii2546.883.53249forward
CNT30228329Phaseolus vulgarisAnanas comosus11.3554.5993.81113forward
CNT30684722Phaseolus vulgarisTriticum urartu2422.484.52239forward
CNT30351849Phaseolus vulgarisEragrostis tef14.7636.9391.16147reverse complement
CNT30364733Phaseolus vulgarisSorghum bicolor6.0224.5986.6760forward
CNT30355468Phaseolus vulgarisLactuca sativa30.0224.4597.32299forward
CNT30416238Phaseolus vulgarisPapaver somniferum44.1857.4495440forward
CNT30324879Phaseolus vulgarisAsparagus officinalis19.9856.786.93199reverse complement
CNT30331679Phaseolus vulgarisDioscorea rotundata17.1724.9695.32171forward
CNT30100515Phaseolus vulgarisOryza rufipogon24.796.8587.8246reverse complement
CNT30578120Phaseolus vulgarisOryza barthii44.7877.4390.58446forward
CNT30604848Phaseolus vulgarisOryza punctata9.1427.8384.6291reverse complement
CNT30726897Phaseolus vulgarisLupinus angustifolius28.7161.1193.36286reverse complement

Expression of CNT30524944

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MFQLNTFLFIILKEEDFFFLFTKHMWIQSRSSNKNKKSFAINPFAPFFNIRK

Sequence

>CNT30524944
CACAGAATTCTATATGTATCTATGATATCTAGTATGGAATTCTGTTTACTCACTTGAAATTGAGTATCCGTTCCCCCTTTTCCTGCTAGGATTGGAAATC
CTGTATTTTACATATCCATACGATTGAGTCCTTGGGTTTCCAAAATAGTGTAAAGTGCTTCGAATCATTGCTATTTGACTCGGACCTATTCTAAAAAAGT
CGAGGCATTTCGAATTGTTTGTTGACACGGACAAAGTCAAGGAAAACCTCTGAAATTCTTTCCATATTGGACCTTGGACATATCATAGTTCCGAATCGAA
TTTCTTTAGAAAGAAAATCTTTTGTCTCATGGTAGCCTGCTCCAGTTCCCTTACGAAACTTTCGTTATTGGGTTAGCCATACACTTTACATGTTTCTAGC
GATTCACATGGCATTTTCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTGACGATCCTTTACTCCGACAGCATCTAGGG
TTCCTCGAACAATGTGATATCTCACACCGGGTAAATCTTTAACCCTCCCCCCTCTTACTAGGACTACAGAATGTTCTTGTAAATTATGGCCAATACCGGG
TATATAAGCAGTAATTTCAAATCCAGAGTTTGGTTTTTTGGGTGTAATAGTGGAAAAGTTGACAGATAAGTCACCCTTACTACCACTCTACAGAACCGTA
CATGAGATTTTCACTTCATATGGCTCCTCGTTCAATTTTTTTTGAAGTCATTGGATCCGTTTCCTAGTTCGGTTCGAGAATCTCTCCCCTTCTTCTATTC
CGTTCCGAAGAGTAACTAGGACCAATTCAGTCACGTTTTCATGTTCCAATTGAACACTTTCCTTTTTATTATTCTAAAAGAAGAAGATTTTTTCTTTCTT
TTTACCAAACATATGTGGATCCAATCACGATCTTCTAATAAGAACAAGAAATCTTTCGCGATCAATCCTTTTGCCCCATTCTTCAATATCAGAAAG