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Detailed information on CNT30524897


BLAST search results

BLAST vs Swiss-Prot:
sp|P49440|CHSY_PHAVU, E-value = 3e-142

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700733Phaseolus vulgarisQuercus lobata61.7390.0280.21379forward
CNT30381286Phaseolus vulgarisManihot esculenta20.3616.5184125forward
CNT30628877Phaseolus vulgarisVigna unguiculata98.3766.4594.21604forward
CNT30195656Phaseolus vulgarisPisum sativum85.3446.1784.54524forward
CNT3045126Phaseolus vulgarisPrunus dulcis38.1122.8184.62234forward
CNT30156272Phaseolus vulgarisPistacia vera77.0430.6781.4473forward
CNT3096085Phaseolus vulgarisSolanum tuberosum22.4828.9984.78138forward
CNT30564018Phaseolus vulgarisActinidia chinensis29.1525.2184.36179forward
CNT3087878Phaseolus vulgarisVigna radiata99.3539.0393.93610forward
CNT30145784Phaseolus vulgarisMedicago truncatula93.8153.1484.03576forward
CNT30610101Phaseolus vulgarisGossypium raimondii56.1913.2381.16345forward
CNT30646903Phaseolus vulgarisRosa chinensis76.2235.479.06468forward
CNT30355633Phaseolus vulgarisLactuca sativa34.8539.1981.31214forward
CNT30151821Phaseolus vulgarisPrunus persica38.1140.6285.04234forward
CNT30705527Phaseolus vulgarisPrunus avium23.7831.5385.62146forward
CNT30644974Phaseolus vulgarisCannabis sativa35.527.1580.73218forward
CNT30114125Phaseolus vulgarisFicus carica95.2875.7878.12585forward

Expression of CNT30524897

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MVCAVQTSSNKGFSICGIGSEPTITAAAPSPNNA*

Sequence

>CNT30524897
TGTCGTTTTAAGTCCATTTTCAACTGATTTCCTCCTCATCTCATCCAAGATGAATAGCACACATGCACTTGACATGTTCCCATAATTGCTAAGCACATCT
CTAGTGGCCTTCATCTTTTCAGGTTTCAAACCCAACTTTTGCTCAACTTGGTCCAGAATTGCAGGTCCACCAGGGTGTGCAATCCAGAAGATGGAGTTGT
AATCAGAGATGTTCAATGGGTTGAAGGCCTCAAAAAGTGCCTTTCCAATGTTCTTTGAGACAATCCCAGGAACATCCTTAAGGAGGTGAAACGTGAGTCC
AACTTCACGAAGGTGGCCATCAATAGCACCATCACTGTCTGGAGCAATGGTCTGTGCAGTCCAAACCAGTTCAAACAAAGGCTTCTCAATCTGTGGAATT
GGGTCAGAACCAACAATCACTGCAGCTGCTCCATCTCCAAACAATGCCTGACCCACAAGACTGTCTAGGTGGGTGTCACTTGGCCCACGGAAGGTGACTG
CAGTGATCTCAGAACACACCACAAGCACACGGGCACCCTTGTTGTTCTCAGCCAAATCCTTGGCCAATCGAAGAACCGTGCCTCCTGCAAAGCATCCTTG
TTGGTACATCATGT