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Detailed information on CNT30524833


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A109QYD3|RMS3_PEA, E-value = 9e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692428Phaseolus vulgarisOryza sativa11.9620.4381.22181forward
CNT30522336Phaseolus vulgarisSetaria italica7.5343.0284.21114forward
CNT3070001Phaseolus vulgarisQuercus suber9.3226.9682.27141forward
CNT3042646Phaseolus vulgarisPrunus dulcis17.8546.5584.44270forward
CNT30296550Phaseolus vulgarisTriticum aestivum9.6534.9388.36146forward
CNT30589135Phaseolus vulgarisMusa acuminata11.9647.1490.06181forward
CNT30552945Phaseolus vulgarisOryza glaberrima11.9622.2181.22181forward
CNT301613Phaseolus vulgarisZea mays9.4525.0985.31143forward
CNT3067156Phaseolus vulgarisLeersia perrieri11.6365.4386.93176forward
CNT30683907Phaseolus vulgarisTriticum urartu12.2328.1687.03185forward
CNT30361799Phaseolus vulgarisSorghum bicolor14.2822.6783.33216forward
CNT30596039Phaseolus vulgarisOryza meridionalis7.1441.2287.96108forward
CNT30369879Phaseolus vulgarisOryza glumipatula11.9625.2181.22181forward
CNT30147849Phaseolus vulgarisBrachypodium distachyon6.8723.5884.62104forward
CNT30575527Phaseolus vulgarisOryza barthii11.9628.6881.22181forward
CNT30116140Phaseolus vulgarisOryza nivara13.8827.2486.19210forward
CNT30603857Phaseolus vulgarisOryza punctata11.9620.881.22181forward

Expression of CNT30524833

Peptides detected in this lncRNA

>peptide 1 (37 aa)
QVSTLGAFGTFLIGPFPSSFYPTLLLPSTTNTTATLN*

>peptide 2 (87 aa)
MVLFPPMCSFMYLATVSGTDMSRAVCMMQQGTLTRPRIPLRSLLKTVRDTNSEMSGRMLNSVRENSRTAVGTSAPTASGAKPFTHAS*

Sequence

>CNT30524833
GCCAGGTGTCAACTTTGGGAGCCTTTGGTACATTTCTCATAGGACCCTTCCCTAGTAGCTTCTACCCTACCCTTCTTCTACCTTCTACTACTAATACTAC
TGCAACACTTAATTAATCAACTACCACGCGCCGCCGTACTCACGCGCTACTGCGACAGTGCAATCTCCAACTGCCGGGCCAGGTAGGAGGGGGCGCTCAG
GTGAGGGAGGTGGCCGTCCGTGTCCAGCCACTGGATGGTGCTTTTTCCGCCGATGTGCTCCTTCATGTACTTGGCCACGGTTTCAGGCACGGACATGTCA
CGTGCCGTTTGCATGATGCAACAGGGCACGCTCACCAGACCCAGAATTCCCCTCAGGTCGCTGTTGAAAACCGTGCGCGACACGAACAGCGAGATGTCCG
GCCGCATGTTGAACAGCGTCCGGGAAAACTCCCGCACCGCCGTCGGCACGTCCGCCCCCACCGCCAGCGGCGCGAAGCCGTTCACCCACGCCTCGTAGTT
GGCCTCCATTGCCGAGAACACCTGCTCGATCTCTCCCTGCTCGAATCCCCCGTGGTAGTCCTTGTCGTTCAGAAATCTGACAAAATTCAACCATCGGTAT
CACTGCTTGGTTGAATGGGTTGGAGAAAGGTGTTTGAGATGAAAAGAAAACAAGATTTTGTGGAAGTGTTGAAATGGAAAAAAAAGCTGGGTTGAAGTTT
GATGTAGGAAAAGAAGTGGAATTGAAAGAGGTGGGTTCATGATTAGCCCCTCCATTATGTAGTTTGAATCCAAACATACACCAATTACACTGAGACCACA
GTTTTTTTTTACCTCAAACAACATAAATCAGTATGAAATTGTCAAGTTCCATGGATCAAAGAAGGTTGAGAAAATAAAATTTAATCCAAACATGAATACA
TACATACAAGTGGTAACAGAAATTTGAAGCAGAGAGGAAGCAAAAATGAAGTAACGGAAGAGGAGAGGGTTTGGTTGGGGTACCTGGGGGAGGCGCCGAT
GAGGATGAGTTTGGAGAAGAGTTCGGGGCGGCGGATGGAGTGGCCGACGTAGGCGCAGCGGGGGACGCGGAGGGCCTCGAGGATGTTGAGGAGGTCGTCG
ACGTAGGCGTCAAGGGTGGTGTAGCGGCGGTAGTCGAAGTGGTCGGGGTTGACGCTGCCGGCGCACACCAGGTCGTAGAGAATGACGCTGTAGTGGCGCG
TGAAGTAGGGGAGCACGCGCTGCCACGCCGACTGGTCCGTGCCGAAACCGTGTGCCAGGACGAGGTACTTGTCGCCGGTGCCCTCCACGCGCACGTTGAG
GGCGTCCAGAATGGAACTCCCCATACCGAATTTGTTCTGATTAAAACGATCAGAGAGAGGAACACTCTCACACACACACACAACAGTAGAGTGATTGGTT
TGGTGTGTGTGCAAGAGAGCGCGTGGCTTCTGTTGTTAACAACAGTCGAAGGTGGTTCTCTTGATTTTATATTTTGTTTCCTTTGTCTCTTTGGCTGCTA
TTTATAACTGCCA