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Detailed information on CNT30524774


BLAST search results

BLAST vs Swiss-Prot:
sp|P31156|METK2_PETCR, E-value = 5e-74

BLAST vs NONCODE:
NONPOPT000585, E-value = 4e-57

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729048Phaseolus vulgarisCorchorus capsularis38.7642.8486.83281forward
CNT30490001Phaseolus vulgarisOlea europaea34.0749.884.21247forward
CNT30712486Phaseolus vulgarisGlycine max60.1454.4391.28436forward
CNT3047443Phaseolus vulgarisPrunus dulcis46.7628.4282.6339forward
CNT30638840Phaseolus vulgarisCapsicum annuum46.0739.1182.04334forward
CNT30508528Phaseolus vulgarisSolanum lycopersicum21.5230.0685.9156forward
CNT30172560Phaseolus vulgarisTrifolium pratense45.3848.3187.23329forward
CNT3059692Phaseolus vulgarisArabidopsis lyrata820.0793.158forward
CNT3017865Phaseolus vulgarisZea mays8.9729.2886.1565forward
CNT30597163Phaseolus vulgarisOryza meridionalis23.4528.6282.94170forward
CNT30432398Phaseolus vulgarisPapaver somniferum48.552982.67352forward
CNT30496713Phaseolus vulgarisDigitaria exilis23.4511.2982.35170forward
CNT30551132Phaseolus vulgarisOryza brachyantha11.4521.586.7583forward

Expression of CNT30524774

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKHANYSSTPGKTSIKEGIKSTTRLGMRLL*

>peptide 2 (33 aa)
LIGTLRLLADYSAPNNDYNNFRTTLAIFQFCER*

>peptide 3 (33 aa)
MITTILEQHWQFFNFVKDKIHCKGFFTLSNYNQ*

Sequence

>CNT30524774
GATTAATTGGCACTTTAAGATTGCTGGCAGATTATTCGGCTCCAAATAATGATTACAACAATTTTAGAACAACATTGGCAATTTTTCAATTTTGTGAAAG
ATAAAATACATTGCAAGGGCTTTTTCACCCTTTCAAATTACAACCAATAGGGGCAAAATTCAGATAAAATTTAATTGCATCAAGAGAGTAATACTGCATT
AACATAAAAATAAATGGTAAGTAAAAATAAACAGTTTAGGTATGATGATAAGGAAATGGCATTAGACCTAGGATCGTAGCAGTAATGAAACACGCAAATT
ATTCATCAACACCTGGCAAGACATCCATTAAAGAAGGGATTAAGTCCACAACACGTCTAGGCATGAGGCTTCTCTGACTTGAGTGGCTTCACCACTTCCC
ATGTGAAGTCAGGGTCATCCCTTCCGAAGTGTCCATAAGCAGCTGTCTTCAGGAACCTGTGGCCACCCCTCTTGAGGTCCAAGTTAATGGTGATCATTCC
AGGTCTGAAGTCGAAATTCTCCTTCACAATCTGAAGAATTTCCTTATCAGGAATCTTTCCGGTTCCATAGGTGTCAACAAAGACTGACAAGGGCTCAGGG
ACACCGATGGCATAAGAAACTTGGACAATGCACCTTCTGGCAAACCCATTTGCCACAACGCTCTTTGCAGCCTGCCTCACAATATAGGCACCACTTCTGT
CAACCTTGGTTGGGTCCTTGCCTGA