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Detailed information on CNT30524694


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M591|CRD1_ARATH, E-value = 1e-33

BLAST vs NONCODE:
NONGMAT001508, E-value = 7e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522654Phaseolus vulgarisSetaria italica60.547.2280.59170forward
CNT30640917Phaseolus vulgarisNymphaea colorata28.119.3386.0879forward
CNT30375469Phaseolus vulgarisArabidopsis thaliana35.9412.9584.16101forward
CNT305932Phaseolus vulgarisZea mays19.9327.7287.556forward
CNT30342208Phaseolus vulgarisEragrostis tef30.626.8883.7286forward
CNT30479309Phaseolus vulgarisArabidopsis halleri40.5725.4582.46114forward
CNT30363833Phaseolus vulgarisSorghum bicolor60.519.2580.59170forward
CNT30620290Phaseolus vulgarisCajanus cajan56.5853.1891.19159forward
CNT3036024Phaseolus vulgarisCucumis melo35.238.2589.999forward
CNT3099936Phaseolus vulgarisOryza rufipogon60.533.8680.59170forward
CNT30574872Phaseolus vulgarisOryza barthii27.412.8187.0177forward
CNT30497686Phaseolus vulgarisDigitaria exilis27.421.6387.0177forward
CNT30115498Phaseolus vulgarisOryza nivara30.612.2383.7286forward
CNT30557967Phaseolus vulgarisPanicum hallii36.6520.5684.47103forward
CNT30115390Phaseolus vulgarisEutrema salsugineum35.9418.7784.16101forward

Expression of CNT30524694

Peptides detected in this lncRNA

>peptide 1 (92 aa)
GITLILGVGLEMSVYGYVSPVPNFLRQVCSIEDKFGSAGPLKELHKDLSEGAFKFVSCFLELLVPHKMGLVVVSLKLLKQGLKLLLVEVLVDL

Sequence

>CNT30524694
GGGATAACATTGATACTCGGGGTTGGCCTTGAGATGTCTGTATATGGTTATGTATCTCCAGTACCCAATTTTCTCAGACAAGTATGTAGCATAGAAGATA
AATTTGGCAGTGCAGGACCTCTCAAGGAACTCCACAAAGATCTGTCTGAGGGGGCCTTCAAGTTTGTCAGCTGCTTCCTTGAACTCCTTGTTCCTCACAA
AATGGGTCTGGTTGTAGTCAGTCTTAAACTCCTGAAGCAAGGCCTCAAACTCCTCCTGGTTGAGGTTCTTGTTGATCTCAG