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Detailed information on CNT30524528


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF89|CB5_ARATH, E-value = 7e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371232Setaria italicaOryza glumipatula20.2712.6893.28134forward

Expression of CNT30524528

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKKANMENMASRPFLISFTLRMAAWSSPLMIR*

Sequence

>CNT30524528
GTAGCATGTCTCAGGCACAAATTCTAACAGTCATATCAGATATTCAGATCAGAGATCGGAACGAAATGGTTTCTTGCCCCTCTTGATAATTTACACGCAT
GGCACATTCATCGGACCCTCACACACACATTGTTTCCGGGTAAGATCAAACGCAGCAGCAGCCTCTCACAGGCTGGGCGGGTCGCTGAGGTGCTTGGCGA
GGTTCTCGACGGGGCCCTCGCCGGTGACGTACGCCTGGATGAAGAAGGCGAACATGGAGAACATGGCGAGCCGGCCGTTCTTGATCTCCTTCACCTTGAG
GATGGCGGCCTGGTCCAGCCCGTTGATGATCCGGTAGTACTCGGCGCCGCCGACGAGGACGACCTCGGCGATGACGGCAACCACCAGGTTGATGGGGATG
CTGTTGCCGAAGTAGCTGAGGGTGTTGCCGTCCAGGAGCAGGGCGCCGGTCTGCATTGTATTACGGTGGCGCCGCCATTAGTTCACAGTTCAGAATTTCA
GTTTCAGAGATTGCAATTGCAACTATTCTACCACTGAAATGTGTGGTCTTTGTGAAACAATGTTGAGTTCTTTTCTTTTTTCATAAATTCAATTGCGCGC
GATTGTCCGGCACATTTGGGGAAGAGATTGCTACTCAAGTATGAAGATTCTTAAAGGTGGT