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Detailed information on CNT30524346


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 3e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30365046Setaria italicaSorghum bicolor47.135.4194.13341forward

Expression of CNT30524346

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MKKANMENMASRPFLISFTLRMAAWSGSLARPNGSNGPPGWSLSSRSSPLMIR*

Sequence

>CNT30524346
GTAGCATGTCTCAGGCACAAATTCTAACAGTCATATCAGATATTCAGATCAGAGATCGGAACGAAATGGTTTCTTGCCCCTCTTGATAATTTACACGCAT
GGCACATTCATCGGACCCTCACACACACATTGTTTCCGGGTAAGATCAAACGCAGCAGCAGCCTCTCACAGGCTGGGCGGGTCGCTGAGGTGCTTGGCGA
GGTTCTCGACGGGGCCCTCGCCGGTGACGTACGCCTGGATGAAGAAGGCGAACATGGAGAACATGGCGAGCCGGCCGTTCTTGATCTCCTTCACCTTGAG
GATGGCGGCCTGGTCGGGGTCGCTGGCCAGGCCCAATGGGTCGAACGGGCCGCCCGGGTGGAGCTTGTCCTCCAGGTCCAGCCCGTTGATGATCCGGTAG
TACTCGGCGCCGCCGACGAGGACGACCTCGGCGATGACGGCAACCACCAGGTTGATGGGGATGCTGTTGCCGAAGTAGCTGAGGGTGTTGCCGTCCAGGA
GCAGGGCGCCGGTCTGCATTGTATTACGGTGGCGCCGCCATTAGTTCACAGTTCAGAATTTCAGTTTCAGAGATTGCAATTGCAACTATTCTACCACTGA
AATGTGTGGTCTTTGTGAAACAATGTTGAGTTCTTTTCTTTTTTCATAAATTCAATTGCGCGCGATTGTCCGGCACATTTGGGGAAGAGATTGCTACTCA
AGTATGAAGATTCTTAAAGGTGGT