Detailed information on CNT30524011


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676593Setaria italicaSetaria viridis70.5645.93100254forward
CNT30366141Setaria italicaSorghum bicolor26.941497.9497forward
CNT30101296Setaria italicaOryza rufipogon30.2818.9694.5109forward
CNT30576141Setaria italicaOryza barthii23.6126.3292.9485forward

Expression of CNT30524011

Peptides detected in this lncRNA

>peptide 1 (37 aa)
AKNFIDWDQTATCRRTRSLNRRRLQRHQPRKQGHDHP*

Sequence

>CNT30524011
CGCGAAGAACTTTATTGACTGGGACCAGACTGCAACCTGCAGACGCACACGATCGCTGAATCGCCGCAGGCTGCAGCGACATCAACCGCGGAAACAAGGA
CACGACCACCCATAACTACCAAACCAACACGGACTCGGACACCACCGCCACCACCAACGACGACATGCACTAGCGCGTGCTAAACGACTGCGATTTCCGC
CTCGGCGGACGGAACGATTTCCGCCTGGTTCTTGAGTAGGTAGTCGTCGAGGTCGTGGAACGTCTTGGTGGCGGTCTCCTTGATGACGTCCGGGTCGGGC
ACCTGCTCGCTGGCCTTGTCGAACTCCATGGACCAGAGGCGGACGGTGCCGGCGGACTTG