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Detailed information on CNT3052385


BLAST search results

BLAST vs Swiss-Prot:
sp|P85088|ATPBM_VITSX, E-value = 7e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30492124Amborella trichopodaOlea europaea7.428.1689.6658forward
CNT30369229Amborella trichopodaOryza glumipatula19.2654.9185.43151forward

Expression of CNT3052385

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MHQRKCEPRRREGRGDQVVAGAGSVKSSAGT*

Sequence

>CNT3052385
ATAGTAATAAGCCTTTAATTTAGTGAGCCAGGTGTTATTTAACAGCTCTGGGTCCAACGACCTAAATCCGCAATCTTTCTCGTAAACCCTACTACAGCAT
GTAACCAAGCACATTTAGAACTTTCCTTTTTTTACAAGTCCAAAACCTTCCAAACAGTTTTCGCTGTGAATAAAATAAGAAGGCATGTTCCAGAGAGCCG
CATACAAAAAAACAGCACAAGCACCCGAGTAAAAAGTACTTCTTAGCGTCCCTTTTTATTTTGGAGAGCGCCAACAACAATGCGCTCATCTCGTCTCTTT
CTCTATTAACCAAACACAGCAGCCAATAGCTGATGACCTTCAAAAATGAAATCTTTTGAGGCAGCACCGATAAAATTATTGATTTTTTATGCATCAAAGA
AAATGTGAACCCAGAAGGAGGGAGGGCAGGGGTGATCAGGTGGTGGCAGGGGCAGGATCAGTCAAATCATCAGCAGGCACGTAAATAGCCTGCACAGAAG
TGATCGAACCCTTCTTTGTTGTTGTGATACGCTCTTGCAAGCCTCCAAGATCAGTGGCTAAGGTTGGTTGATAACCCACAGCAGATGGGATACGCCCAAG
CAGAGCAGACACTTCAGAGTTTGCCTGTCAAAAAGAGCAAAAATCTCATTAACTCATAATCATAACAATGATAAATAGTTACATACTTCTGTGAAGCACA
AACACCCAAAGAAAAATCATATTAGAAGATAATAATAAAGTACAATTGTTGTAAAAAATTGATAGCTTGTTTTTAATGGAGGGC