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Detailed information on CNT30523814


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676490Setaria italicaSetaria viridis97.4101.3595.1449forward

Expression of CNT30523814

Peptides detected in this lncRNA

>peptide 1 (61 aa)
KKCCNPLIRSFIVLFNTGMEHQRFRARHVYRQEWTSRCNPNIPTRRSPITATAYHTSSAAG*

Sequence

>CNT30523814
AAAAAAGTGTTGTAATCCGCTAATCCGGAGCTTTATTGTGCTGTTCAACACTGGAATGGAGCATCAGAGGTTCAGAGCACGGCACGTCTACAGGCAGGAA
TGGACAAGCCGGTGCAATCCAAACATTCCAACTAGGCGGTCACCAATTACTGCTACTGCGTACCATACATCGAGCGCTGCAGGCTAGTCCGGCCTGGACA
GCGGCGGCTACTCGAAGTTGTAGTGCTTGTCGACGGCCTCGGCGACGTCCCAGGTGCAGCTCATGCCCTTGGGGAAGACGACCAGGTAGCACGTCTCCTT
GGCCGAGTAGCTGAGGCGGCCGGTGCTGGTGCGGAGCTGGACCGGAGTGGCTACCATTGGGCTCGCCATCTCTCTCTCAAAAGCGGTATGCGAGGGCAAC
TCCGTTTGGGCCTTCGCACGTAGTGAACCGTGTGGGGCGCAGCAAGCGAGCGATCAGTGAG