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Detailed information on CNT30523385


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 1e-86

BLAST vs NONCODE:
NONBNAT003938, E-value = 1e-57

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675606Setaria italicaSetaria viridis45.2851.899.71345forward
CNT30512942Setaria italicaJuglans regia27.4341.2281.82209forward
CNT3071729Setaria italicaQuercus suber16.444.6484125forward
CNT30712340Setaria italicaGlycine max27.4336.3582.3209forward
CNT3094731Setaria italicaSolanum tuberosum27.4313.9284.69209forward
CNT30299505Setaria italicaTriticum aestivum20.2114.189.61154forward
CNT30566784Setaria italicaActinidia chinensis25.0725.1381.68191forward
CNT30145759Setaria italicaMedicago truncatula25.0750.480.63191forward
CNT3061941Setaria italicaArabidopsis lyrata12.3436.1588.394forward
CNT30613762Setaria italicaArabis alpina21.9241.7585.03167forward
CNT3012962Setaria italicaZea mays17.9821.0485.4137forward
CNT30652959Setaria italicaRosa chinensis24.6739.0985.11188forward
CNT30625276Setaria italicaDaucus carota31.7617.2180.99242forward
CNT30348495Setaria italicaEragrostis tef39.1110094.97298forward
CNT30366950Setaria italicaSorghum bicolor34.9131.0791.35266forward
CNT30418103Setaria italicaPapaver somniferum27.353.3384.13208forward
CNT3022206Setaria italicaPopulus trichocarpa30.5842.8383.69233forward

Expression of CNT30523385

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MNSFVPDRAMVPRLFTRSDLVIPIPLSMIVSVLEALSGTMWMNSSGWASSLLLSVKLSNLILSKACKSPQKYKFRV

Sequence

>CNT30523385
GAAATGCGTTATCTAACAGCAATATCCCAAATGATCCTCTAAGAGTGAATCTAATGTAATCCACATTTACAGTTAGTTATAACAAACCAAACATATTGGA
GCTATATATGCTTTCAATTCAGCTTCCCAACAGATCAGCACCACAAACTAACATAGCATAATGGAACCGTGTGATTTCAACAAAGGTACGACCAAAAAGC
ATCAGCTGTATCTAAATAATCCTATAAAACAGTAAATAGCTATGGCAGCATCACCAATAGTAATTAACACACCACAGGCACTAATCCGGGAAGTTTCTGC
TATACCTGATCATCCTTGAGGTAGAGGATCATCTTGGTACCCCTGCCAAGGGTCTCCCCAGAGGTATCACGTGTGACGGTGAAGGAGCCACCAGCCTGAG
ACTCCCACACGTACTGCTCATCATCGTTGTGCTTGGTGGTCACAACAACTCTCTCAGCAACAAGGTAGGCAGAGTAGAAACCAACTCCAAACTGACCGAT
CATAGACACATCAGCACCAGCAGCCAGAGCCTCCATGAACTCCTTTGTTCCTGACCGTGCAATGGTACCAAGGTTGTTCACGAGATCTGACTTGGTCATA
CCAATACCACTGTCAATGATTGTCAGTGTGTTGGAGGCCTTGTCAGGAACAATGTGGATGAACAGCTCTGGCTGGGCATCGAGCTTGCTCTTGTCCGTCA
AGCTCTCAAACCTGATCTTGTCCAAGGCCTGTAAAAGCCCACAAAAATACAAGTTCAGGGTT