« Back to Setaria italica search


Detailed information on CNT30523258


BLAST search results

BLAST vs Swiss-Prot:
sp|Q84PD8|SAP11_ORYSJ, E-value = 8e-59

BLAST vs NONCODE: nothing found

Expression of CNT30523258

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLPPSQNLTILAARTTGFSRAMASRPTPL*

>peptide 2 (53 aa)
MPPMICSIFFPSSSSSCLWDPQEQHDDNTLARPVTFKFLVKKEKKEKRNKKGT*

>peptide 3 (90 aa)
MAPVDRRRPGRLVGRGRLHGPPRWPVNGRRERRHHRQRRWRREGGGRSWPRLVERRGGSRRGRRRRPGSSSGTGSWWPGSPGSRSCWRRA*

Sequence

>CNT30523258
AGGTAGTAGCTCAAGCTGGGCAATAGGGAGATTCCAATTTATAATTTAATTTTATACAGAGAGAGAGAGAGAGAGAAAATTAAATAGAAGATTGTGATTT
GTAGTAGGACAACACACCAAACCAACCCTATCTCTTCCCCTCCACCCCCAACCACCGCTACAACAACATTATCATCGCACTGTTCTTGCTTTTGATCCCT
TTCGTAGCTGCTTCCCCGCCTGCCATGCCTCCCATGATCTGCTCCATCTTTTTTCCTTCATCTTCTTCTTCTTGTTTATGGGATCCTCAAGAACAGCACG
ATGATAACACCCTCGCTCGACCGGTCACCTTTAAATTTCTTGTAAAGAAGGAAAAGAAAGAAAAGAGAAATAAAAAGGGAACTTGAGAGGGAGATCCAAC
GATCGATCGATCTCTGCGGATCGGTGTAGGCGTCCTCCGTCCGATGCTCCCTCCCTCTCAGAACCTAACGATCTTGGCCGCGCGCACGACGGGGTTCTCC
CGGGCGATGGCGTCCCGGCCGACGCCCTTGTAGTCGAAATTGCAGTCGTGGCGGTCCGAGTACCGGTGCGCGCCGCAGAAGAGCTCGCCGCACCGGCACC
GGAACCCCGTCAGCCCCACGCGCTTCCGGCAGTTATGGCACCGGTTGACCGACGACGTCCGGGGCGCCTTGTTGGAAGAGGACGACTCCACGGGCCCCCC
CGCTGGCCGGTCAACGGCCGGAGAGAACGGCGCCACCACCGCCAGCGGCGTTGGCGCAGAGAAGGCGGAGGCCGCAGCTGGCCACGGCTTGTCGAACGCC
GCGGTGGTAGTAGAAGGGGACGGCGACGGCGGCCAGGAAGCAGTTCTGGCACAGGTTCTTGGTGGCCGGGTTCCCCGGGAAGCCGCAGCTGTTGGCGCAG
AGCGTGAGCTCCGGCGCGTGCAGCTCCGTTGGCTCCTCCACCTTCTTGTCGCGCTGCGCCATGAGAAAATAGGTGTGTGTGTAGAGCCTCGCGACGGCTC
GGTGTGAATCCGGCAGCGAGGCGGCGGCTCTGGGCGATCCGGCGGGGCCGCGGGGAGGGGAGGAGAGCAGAGCACAGGAGGAGGCGGAGGCACACCGGCG
GCCTGGCCTGAGCTGAG