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Detailed information on CNT30523223


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZP9|CP122_ARATH, E-value = 1e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675067Setaria italicaSetaria viridis40.5662.1598.51202forward
CNT30515591Setaria italicaJuglans regia25.724.6682.81128forward
CNT30617555Setaria italicaSesamum indicum26.3121.7682.44131forward
CNT30729972Setaria italicaCorchorus capsularis26.9123.2685.07134forward
CNT30710175Setaria italicaGlycine max24.530.8183.61122forward
CNT30290105Setaria italicaTriticum aestivum46.7951.3286.7233forward
CNT30387749Setaria italicaTriticum turgidum46.5936.4287.07232forward
CNT30592246Setaria italicaMusa acuminata34.3429.1887.72171forward
CNT30246208Setaria italicaAvena sativa28.3124.8790.78141forward
CNT30659185Setaria italicaTriticum dicoccoides46.5943.5387.07232forward
CNT30134237Setaria italicaLolium perenne29.5223.3792.52147forward
CNT3015512Setaria italicaZea mays47.7927.6786.97238forward
CNT30216686Setaria italicaKalanchoe fedtschenkoi30.1226.1386.67150forward
CNT30620908Setaria italicaCajanus cajan28.512085.21142forward
CNT30580422Setaria italicaEchinochloa crusgalli46.5934.5887.93232forward
CNT30497736Setaria italicaDigitaria exilis48.5934.8789.67242forward
CNT30557621Setaria italicaPanicum hallii45.5841.3593.39227forward

Expression of CNT30523223

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MFITNLAYRQAGAPISCRRCGTRRSPGSPCSTSRAGRCPP*

Sequence

>CNT30523223
AGATTACTTATGGTCCCAAAGTGGTCCTATCTTTGGATCATAATCCACCTAAAGCTTCGTGTAAATTCACCGAGTTATAGCTAGAACCCGCTTTTCCATC
ACTTCACTATATATCCTTCCTTCAACCATGTTTATAACGAATTTAGCATACAGGCAAGCAGGCGCGCCGATCAGTTGTCGTAGGTGCGGCACTCGTCGGT
CTCCGGGTTCTCCTTGCAGTACTTCTCGAGCGGGTCGTTGTCCTCCTTGAGCTTGTCCCGGGCGTGGCTCGCCGCGGCGCTGAGCTCCTCCACCTCGTCC
CACGCCGCCGCGCACTCGCCCGAGCCCTCCTCGCCCTCGCACGTCTGCTCCGCCTTCTTGATGCTCTCCGACACCTGGTCGGAGATCCCCGGCGGCGTGG
CCGGCCCGCTCGCCACCGTCGACGCCATCTTTGCAGCTAGCTAGCTGTGTGTCTCGAAGTTTTTTCTGTGATCTGTTGTGGCTTTACTTGAAGAACTG