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Detailed information on CNT30523110


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721242Setaria italicaTriticum spelta40.6832.2981.94299forward

Expression of CNT30523110

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MPRPRSQPGISGKTSLMSSRSRSISSSSSSAKSPNSRSWSSSKQKGASETSRASRPARKSIGSMSGSCSPRRRSW*

>peptide 2 (95 aa)
QAHFITPTSITLRHLLNSHAEIHGLQEVVHAAAEVAAGDLREDVVDVVEVEVDLIQLLVREVPEQQVLVVVQAEGRIGNIQGVQAGAEVHRVDVG*

Sequence

>CNT30523110
CACAGGCCCATTTTATCACACCAACATCGATAACACTAAGGCACTTGCTTAATTCACACGCAGAAATCCACGGTTTGCAGGAAGTCGTCCATGCCGCGGC
CGAGGTCGCAGCCGGGGATCTCCGGGAAGACGTCGTTGATGTCGTCGAGGTCGAGGTCGATCTCATCCAGCTCCTCGTCCGCGAAGTCCCCGAACAGCAG
GTCCTGGTCGTCGTCCAAGCAGAAGGGCGCATCGGAAACATCCAGGGCGTCCAGGCCGGCGCGGAAGTCCATCGGGTCGATGTCGGGTAGCTGCAGCCCG
CGCAGAAGGTCCTGGTAGAACTCCGGGTCGTCCGGCAGCTGCGCAGCTTCAGTGGACGGCAGGATAGGTGTTGCAACCGGCTCCGGCGACTCAGCCTTCA
GTGCAGGCTTGGTGGCTTCGAGCACGGAGGACGGCGACGGGTGGGCGAACGGAGCAGCCGAGGTGGACGACGAAGAGGAGGCCGTCGGGGTGGCGCTTGC
CGAAGAAGCTGGTGAAGAAGCGGGCACGGGCTGCCCGCGGCGCCGGCGTTTTTCATCGGCGAAGCTCCTGGAAGCGGACAGGTAGGCGGCAGAGGCCGCG
CCGGCGGCTGCATCTGCGGCCTGGCCTTGAGGAGAGCAGCGGAGGGTTTAAGGCCAAATCCTGAGATCCTCTTGGTCTTGGGCTTCTTCGCCAGGGCCTT
CTTGATGAGCATCTGCTGGTGGTTCAACGGAGCCA