Detailed information on CNT30523010


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674377Setaria italicaSetaria viridis26.0732.6498.7379forward
CNT30264426Setaria italicaBrassica rapa28.7116.783.9187forward
CNT30497686Setaria italicaDigitaria exilis95.3881.1888.24289forward
CNT30550454Setaria italicaOryza brachyantha27.067.4795.1282forward

Expression of CNT30523010

Peptides detected in this lncRNA

>peptide 1 (99 aa)
LVELLVDLGVEEALHLVEVGGVEPRREQRLLDLRLAPLLGARGLGRRGGGLGGHPAVVVHCGGVEEGELHGSGGHWCRRRRVARRALGSGSELSWGRWGY

Sequence

>CNT30523010
CCTGGTTGAGCTGCTTGTTGATCTCGGCGTTGAAGAGGCGCTCCATCTCGTCGAAGTCGGTGGTGTAGAACCGCGGCGTGAGCAGCGTCTCCTGGATCTC
CGTCTTGCCCCGCTTCTTGGGGCCCGAGGCCTTGGGCGGCGCGGCGGGGGTCTTGGCGGACACCCCGCGGTGGTGGTGCATTGCGGCGGGGTTGAGGAGG
GAGAGCTCCATGGCAGCGGAGGCCATTGGTGCCGGCGGCGACGTGTGGCTCGGCGAGCGCTGGGCAGCGGGAGCGAGCTGAGTTGGGGGCGCTGGGGGTA
TAT