Detailed information on CNT30522866


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674846Setaria italicaSetaria viridis57.8845.999.57235forward
CNT30222634Setaria italicaHordeum vulgare35.2245.2591.61143forward
CNT30456759Setaria italicaSaccharum spontaneum42.6136.9797.69173forward
CNT306195Setaria italicaZea mays39.1642.0697.48159forward

Expression of CNT30522866

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MRMIYSFSSSPMMNLPDVEEHERLDLVDGHARLDVELRQRALPRDDLADDGEGHAQLRQPPHEQLVRLGEPKQ

>peptide 2 (45 aa)
MGTPVSMLSCASAPFPVMISPMMEKATPSCASRPTNSSFDLVNPNS

Sequence

>CNT30522866
CGGAACTAAACAACATCTTACTCTAAGAGAACACTGACAGTCTGGCAGCCATTGGATATTAGCTAAGCTCTTGTTTTTACAATACAACCCAACGCAACAC
CCTACCTTCAAAGGCCTCACGCGTAATACACAACAAAGCACGCACACGCACAGAGACGCACTGATCGATCAATCACAAACAAAACCATGCGCATGATTTA
CTCTTTTTCGTCGTCGCCGATGATGAACTTGCCGGACGTTGAAGAGCACGAGCGGCTCGATCTCGTTGATGGGCACGCCCGTCTCGATGTTGAGCTGCGC
CAGCGCGCCCTTCCCCGTGATGATCTCGCCGATGATGGAGAAGGCCACGCCCAGCTGCGCCAGCCGCCCCACGAACAGCTCGTTCGACTTGGTGAACCCA
AACAGC